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SCN18_30_10_14_R2_B_scaffold_13158_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1426..2145

Top 3 Functional Annotations

Value Algorithm Source
Putative integral membrane transport protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RF22_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 230.0
  • Bit_score: 264
  • Evalue 6.60e-68
ABC transporter permease {ECO:0000313|EMBL:KDP92639.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 230.0
  • Bit_score: 266
  • Evalue 3.20e-68
transport protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 230.0
  • Bit_score: 264
  • Evalue 1.90e-68

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_65_23 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGTCGGACTGCGGAATTATGTCGATCGCCGCACTCGGCAAGACAGCCATCTTCACGGTGTTCTCCATTGCCGGACAGATGGTGGTCGGCATGCTGCTCGCGCTCTTCTTCCGGCGCGCCTTCCCGTTCGGTTCGGCGATGCGGGCGCTGCTGCTTGCCCCCTGGCTGCTTCCCATCGTGGTTTCGGCATCGGTCTGGCGCTGGATGTTCGCGCAGGACACCGGCATCATCAATTATGTGCTGTTGAGTGCCGGCATCGTCTCGGAACCTGTCCCATGGCTGATCGAGCCCGCCTATGCGCTCTGTGCCGTGATCCTCACCAATATCTGGATCGGCATTCCCTTCTCGATGGCTGTCTTCCACAGCGGTCTCCAGGCATTGCCCAAGGAGATTTTCGAGGCGGCCGAGATCGACGGAGCCAACGCCTGGCAGCGCTTTCGGTTCGTGACCCTGCCCCTATTGAAGCCGCTGACCGCGATCGTCTTCATCCTCTCGGTGACCTACACTGTCAAGGTGTTCGACCTCATCTTCGTGATGACCGGTGGCGGGCCGGCCTATGGCACGGAGACGCTGGCGATCCGATCCTACCAGCTGTCCTTCCGCGATCTAGACTTTGGGCACGGTGCGGCCGTCGGCCACGTGCTCATCCTGATCTCGCTCTGCTTCGCTTTCTTCTACATCCGGTCCTTCAAGCGCAGCATGATCGTGGAGGAAGGCTGA
PROTEIN sequence
Length: 240
MSDCGIMSIAALGKTAIFTVFSIAGQMVVGMLLALFFRRAFPFGSAMRALLLAPWLLPIVVSASVWRWMFAQDTGIINYVLLSAGIVSEPVPWLIEPAYALCAVILTNIWIGIPFSMAVFHSGLQALPKEIFEAAEIDGANAWQRFRFVTLPLLKPLTAIVFILSVTYTVKVFDLIFVMTGGGPAYGTETLAIRSYQLSFRDLDFGHGAAVGHVLILISLCFAFFYIRSFKRSMIVEEG*