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SCN18_30_10_14_R2_B_scaffold_16845_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1205..2479)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-70 factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 424.0
  • Bit_score: 656
  • Evalue 1.80e-185
ECF subfamily RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EHK57338.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 424.0
  • Bit_score: 656
  • Evalue 2.50e-185
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 424.0
  • Bit_score: 634
  • Evalue 2.10e-179

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Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGGCCGACATACGCTGGATAGACGCCGCACTCTCCGCCGCCCGGCCGCAGGCCGTTGCAGCGCTTCTGCGCTATTTCCGTGACCTCGACACGGCGGAGGAGGCGTTTCAGGAAGCTTGCCTGCGCGCGCTGAAGAACTGGCCGAAGAACGGCCCGCCGCGCGATCCGACCGCATGGCTGATCTTCGTCGGCCGCAACAGCGGTATCGACCAGGTACGGCGGCTGAGCAAGCAGACGGAACTACCTGACGAAGAAAAGCTTTCCGATCTGGGCGACCGGGAAAGCGACCTCGCCGAACGGCTCGATAATGCCGACTATCGCGACGACGTTCTGAGACTGCTTTTCATTTGCTGCCACCCCGAGCTTCCAGCGACGCAGCAGATCGCGCTCGCGTTGCGCATCGTCTCCGGCCTGTCGGTGAGACAGATCGCCCGTGCCTTCCTTGTCGGCGAGAGCGCGATGGAACAGCGCATCACCCGCGCCAAGGCGCGCATCGCCAGGGCCGACATACCGTTCGAGGCGCCTGGGGCGCCTGAGCGCGCCGAGCGCGTCTCTATGGTCGCGGCGATGATCTACCTCGTCTTCAACGAAGGCTATTCGGCCAGCGGCGAAACGACGGGCATGCGCGCCCCGCTCTCGGAAGAGGCAATCAGGCTGGCCCGCCTTTTGTTGCGCCTTTTCCCGACGGATCCCGAGATCATGGGGCTGACGGCGCTTCTCCTGTTGCAACATGCCCGCGCCGCCGCGCGCTTCGATGCACAAGGCCAGGTCGTGCTTCTCGAAGACCAGGACCGATCGCTATGGAACCGGCCGATGATCGCCGAAGGGCTGGCGCTGATCGACAAGGCGGTGCGGCACCGGCAGCCCGGTCCCTACCAGATCCAGGCGGCGGTCGCTGCCCTTCACGCGCGCGCCGCGACGGCCGAGGACACGGACTGGGCGGAGATCGACCAACTCTACGCGGCGCTGGAGAAGATGCGGCCCTCGCCCGTGGTGACGCTCAACCGCGCCGTCGCGATCTCGAAACTGCATGGTCCCGCAACTGCGCTCGCCATGATCGAGCCGCTTGCGGAGAAGCTCGACGGCTATTTCTATTTCCACGGCGTGCGCGGTGCCCTCCTCATGCAGGACGGACACGGGCGCGAGGCCTGCGAGGCCTTCGGCAAGGCCATCTCGCTCGCCAACACACCCGCCGAGGCCGCCCATATCCGCCTCCAGCTCGACCGGCTGCAGAAGGATGGCGCGGCGATGAACCCGACGAAAGCGGCGTCCTGA
PROTEIN sequence
Length: 425
MADIRWIDAALSAARPQAVAALLRYFRDLDTAEEAFQEACLRALKNWPKNGPPRDPTAWLIFVGRNSGIDQVRRLSKQTELPDEEKLSDLGDRESDLAERLDNADYRDDVLRLLFICCHPELPATQQIALALRIVSGLSVRQIARAFLVGESAMEQRITRAKARIARADIPFEAPGAPERAERVSMVAAMIYLVFNEGYSASGETTGMRAPLSEEAIRLARLLLRLFPTDPEIMGLTALLLLQHARAAARFDAQGQVVLLEDQDRSLWNRPMIAEGLALIDKAVRHRQPGPYQIQAAVAALHARAATAEDTDWAEIDQLYAALEKMRPSPVVTLNRAVAISKLHGPATALAMIEPLAEKLDGYFYFHGVRGALLMQDGHGREACEAFGKAISLANTPAEAAHIRLQLDRLQKDGAAMNPTKAAS*