ggKbase home page

SCN18_30_10_14_R2_B_scaffold_16242_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2391..2816)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 141.0
  • Bit_score: 225
  • Evalue 5.70e-57
Formamidopyrimidine-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000255|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103}; Short=AP lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_00103};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 141.0
  • Bit_score: 225
  • Evalue 2.80e-56
Formamidopyrimidine-DNA glycosylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=FPG_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 141.0
  • Bit_score: 225
  • Evalue 2.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GCGCTCGACGGAAAGCTTCTGTCTGGCCTCTTCAGCGGCCGCAAAGCGCCGCTCAAGGCGGCGCTGATGGACCAGCGCATCATCGCCGGCCTCGGCAACATCTATGTCTGCGAGGCGCTCTGGCGCGCGGGGCTTTCGCCGCGCCGCAGCGCCGGCTCGATCGCGGGGGCGGCCGGGAAAACGACCCCACGCACCGACCGGCTCGCGGAAGCCATCCGAACCGTCATCGCCGATGCCATCGCGGCGGGAGGCTCGTCCCTGAAGGACTATATGCATGCCGACGGATCGCTCGGCTATTTCCAGCATTCCTTCGACGTCTACGACCGCGAGGGCGAGCCCTGCCACCGCTCGGGCTGCGGAGGCACGATCCGGCGCATCGTCCAGTCCGGGCGCTCGACCTTCTATTGCCCGGTCTGCCAACATTAG
PROTEIN sequence
Length: 142
ALDGKLLSGLFSGRKAPLKAALMDQRIIAGLGNIYVCEALWRAGLSPRRSAGSIAGAAGKTTPRTDRLAEAIRTVIADAIAAGGSSLKDYMHADGSLGYFQHSFDVYDREGEPCHRSGCGGTIRRIVQSGRSTFYCPVCQH*