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SCN18_30_10_14_R2_B_scaffold_23389_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 3..266

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6B5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 86.0
  • Bit_score: 166
  • Evalue 1.20e-38
Neu5Ac permease {ECO:0000313|EMBL:CEG08134.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 86.0
  • Bit_score: 166
  • Evalue 1.60e-38
dctM2; TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 86.0
  • Bit_score: 139
  • Evalue 4.30e-31

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
CTGCCGATCATCACCGCAGCGGGCTTCGACCCGATCTGGTTCGGCGTCATCATCACCATCAACATGGAAATCGGCCTGATCCACCCGCCGGTGGGGCTCAACATCTATATCGTCAATTCCATCGCGCCCGACGTGCCGCTGACCCGCATCATCTGGGGGACGCTGCCCTTTGTCGCATGCATGATGCTCGAGATCGTCATACTCTGTATCTTTCCCGAGATCGCGACATGGCTTCCGACCTATCTGATGGGACCCGGCACATGA
PROTEIN sequence
Length: 88
LPIITAAGFDPIWFGVIITINMEIGLIHPPVGLNIYIVNSIAPDVPLTRIIWGTLPFVACMMLEIVILCIFPEIATWLPTYLMGPGT*