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SCN18_30_10_14_R2_B_scaffold_31436_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1881..2606)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036C928F similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 276
  • Evalue 1.30e-71
Transcriptional regulator {ECO:0000313|EMBL:EJJ27608.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 225.0
  • Bit_score: 272
  • Evalue 4.50e-70
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 237.0
  • Bit_score: 239
  • Evalue 6.50e-61

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
TTGGATAAATCTCGCCAGCACTCATTGGAACGAGCCAGGGTTCTGGTGAGCCGTATTATTGCCGAGCGGCATGATCGTCCCTCCCTTGTCTCCGAAATCGCCTGCGTAGTAGGTGCGGAAATTATCGAGGGCCAACGCCTACCGGGAGACGATCTCAATTCCGTTGAACTTTCCAAACGGTTCGACACCAGCCGAACGCCTATTCGGGAGGCGTTGCTGCTTCTCGAAAAGGAAGGTCTGGTCGATGTAAAGCCTCGCAGGCGCCCTCGCGTCGCCTCCCTTTCCCTCACCGAGATTCGCGAAATATACCACGTTCGTGCAGCGTTGTTCGAAATCGTCGCAACCGATGTCGCGCGAACCGTGACCGCCGAGGGGATAAGGGTTCTGGCCGGTGCGGTTGCCGGGATGGCGCGGGCATGCCGCGACGGGGATCTCGATGCGTTCGTCTGGGCCAATCTCGATTTCTACGAGCACAACACCCAGTTCGCCAACAACCGGACCGTCAAACGCATTATGGATTCACTCGTGATCCGAACGGCACGCCTGCGACGCCTGAGCCTGGAGAAGCCCGCCCGCATGGCGCAGTCTCTCGACGACCATGCCCGCATCCTGCGCGCTTACGAGGATCGCGATGCCGCACTGGCTGCGGCTCTCATCCGGTCCAACCATATCAATGCCTTGGCCGCTCTGGAAAATAACATGTTCGAAGGGTCCATCGCACACTGA
PROTEIN sequence
Length: 242
LDKSRQHSLERARVLVSRIIAERHDRPSLVSEIACVVGAEIIEGQRLPGDDLNSVELSKRFDTSRTPIREALLLLEKEGLVDVKPRRRPRVASLSLTEIREIYHVRAALFEIVATDVARTVTAEGIRVLAGAVAGMARACRDGDLDAFVWANLDFYEHNTQFANNRTVKRIMDSLVIRTARLRRLSLEKPARMAQSLDDHARILRAYEDRDAALAAALIRSNHINALAALENNMFEGSIAH*