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SCN18_30_10_14_R2_B_Rhizobiales_63_8

In projects: SCN18_30_10_14_R2_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_30_10_14_R2_B_concoct_131

Displaying items 951-1000 of 1283 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_30_10_14_R2_B_scaffold_19499
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
3 2444 bp 63.26 8.90 89.12
SCN18_30_10_14_R2_B_scaffold_42319
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1335 bp 62.85 8.99 82.25
SCN18_30_10_14_R2_B_scaffold_15968
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 2853 bp 63.02 8.25 96.53
SCN18_30_10_14_R2_B_scaffold_22345
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 2200 bp 64.77 9.55 98.18
SCN18_30_10_14_R2_B_scaffold_45289
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (100%)
2 1266 bp 63.19 7.23 99.76
SCN18_30_10_14_R2_B_scaffold_32282
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1654 bp 63.85 7.44 95.22
SCN18_30_10_14_R2_B_scaffold_35499
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1535 bp 63.32 7.13 88.73
SCN18_30_10_14_R2_B_scaffold_45547
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (100%)
2 1260 bp 65.63 5.95 100.24
SCN18_30_10_14_R2_B_scaffold_47220
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (50%)
2 1223 bp 64.76 6.50 97.87
SCN18_30_10_14_R2_B_scaffold_43860
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1299 bp 63.28 8.55 96.77
SCN18_30_10_14_R2_B_scaffold_20228
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (50%)
2 2378 bp 64.05 5.24 81.88
SCN18_30_10_14_R2_B_scaffold_54098
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1783 bp 60.74 8.75 100.11
SCN18_30_10_14_R2_B_scaffold_30197
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1739 bp 61.24 5.18 75.91
SCN18_30_10_14_R2_B_scaffold_16054
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 2841 bp 59.70 8.34 75.82
SCN18_30_10_14_R2_B_scaffold_32032
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 1663 bp 65.84 12.99 100.12
SCN18_30_10_14_R2_B_scaffold_41104
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 (100%)
2 1367 bp 59.62 4.83 97.66
SCN18_30_10_14_R2_B_scaffold_58442
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1032 bp 62.79 6.83 72.97
SCN18_30_10_14_R2_B_scaffold_50163
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 1167 bp 67.35 9.77 98.97
SCN18_30_10_14_R2_B_scaffold_28220
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1835 bp 63.11 7.44 100.05
SCN18_30_10_14_R2_B_scaffold_59849
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1012 bp 66.90 6.23 99.90
SCN18_30_10_14_R2_B_scaffold_34676
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (100%)
2 1564 bp 62.98 9.49 93.03
SCN18_30_10_14_R2_B_scaffold_21566
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 2263 bp 62.84 7.16 97.17
SCN18_30_10_14_R2_B_scaffold_28222
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1835 bp 62.51 8.34 90.08
SCN18_30_10_14_R2_B_scaffold_21568
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 2263 bp 64.91 9.21 76.49
SCN18_30_10_14_R2_B_scaffold_60240
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (50%)
2 1007 bp 62.16 11.02 85.50
SCN18_30_10_14_R2_B_scaffold_81690
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1365 bp 62.71 6.37 51.65
SCN18_30_10_14_R2_B_scaffold_29632
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1765 bp 61.64 6.37 99.77
SCN18_30_10_14_R2_B_scaffold_21569
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 2263 bp 64.07 7.62 82.85
SCN18_30_10_14_R2_B_scaffold_8969
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 4511 bp 63.71 9.71 100.02
SCN18_30_10_14_R2_B_scaffold_25761
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1967 bp 64.46 10.07 92.73
SCN18_30_10_14_R2_B_scaffold_19521
Species: SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 (50%)
2 2442 bp 52.58 5.34 74.32
SCN18_30_10_14_R2_B_scaffold_35003
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1553 bp 60.27 6.18 99.68
SCN18_30_10_14_R2_B_scaffold_51844
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1137 bp 59.37 5.80 99.74
SCN18_30_10_14_R2_B_scaffold_26860
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (50%)
2 1906 bp 62.07 6.45 46.69
SCN18_30_10_14_R2_B_scaffold_56661
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (100%)
2 1058 bp 61.81 4.82 100.10
SCN18_30_10_14_R2_B_scaffold_28998
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (50%)
2 1797 bp 63.33 7.35 75.96
SCN18_30_10_14_R2_B_scaffold_29382
Species: CN-SCN_Mesorhizobium_20x (50%)
2 1777 bp 63.65 7.68 98.76
SCN18_30_10_14_R2_B_scaffold_51079
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
2 1151 bp 58.73 6.78 99.04
SCN18_30_10_14_R2_B_scaffold_37097
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1483 bp 61.43 7.79 91.44
SCN18_30_10_14_R2_B_scaffold_20249
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 2376 bp 65.19 8.14 100.13
SCN18_30_10_14_R2_B_scaffold_14674
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 3048 bp 63.12 6.79 100.10
SCN18_30_10_14_R2_B_scaffold_36426
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1506 bp 65.21 9.26 99.00
SCN18_30_10_14_R2_B_scaffold_75583
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 1700 bp 62.12 6.26 67.76
SCN18_30_10_14_R2_B_scaffold_57162
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (100%)
2 1051 bp 65.37 6.28 100.19
SCN18_30_10_14_R2_B_scaffold_26101
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 1946 bp 55.65 7.09 76.31
SCN18_30_10_14_R2_B_scaffold_32822
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1633 bp 65.34 6.52 87.45
SCN18_30_10_14_R2_B_scaffold_32823
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (100%)
2 3191 bp 59.73 7.38 98.53
SCN18_30_10_14_R2_B_scaffold_27855
Species: SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 (50%)
2 1854 bp 61.76 11.25 98.38
SCN18_30_10_14_R2_B_scaffold_10368
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 4014 bp 61.93 7.40 96.04
SCN18_30_10_14_R2_B_scaffold_41385
Species: SCNPILOT_CONT_750_P_Mesorhizobium_63_10 (100%)
2 1360 bp 59.71 8.27 95.29
Displaying items 951-1000 of 1283 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.