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2019_SCN_bioreactor_t1_biofilm_scaffold_58382_7

Organism: 2019_SCN_bioreactor_t1_biofilm_Verrucomicrobia_66_15

near complete RP 50 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: comp(3958..5541)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 383.0
  • Bit_score: 362
  • Evalue 5.10e-97
Integrase family protein {ECO:0000313|EMBL:EEF57028.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 383.0
  • Bit_score: 362
  • Evalue 7.20e-97
site specific recombinase similarity KEGG
DB: KEGG
  • Identity: 24.1
  • Coverage: 345.0
  • Bit_score: 74
  • Evalue 6.00e-11

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1584
ATGACAACATGCAGCTATATGCCTGAAAATAAGGGGAATCGCGAAGATTGTCCAGAACTGCGGACAACCGATCTGATACCACAATGTGATACTGTTTCCGTGAAAGCCGGAAACAGCAAAACCAAGAGCCTCTGGACGAAGGCTCCCGTCGCCAATCTCGTCCGCTACGAGCCGTCTGGCATCTACTTCGTTCGCGCGAAGGTGCGCGGGAAGCTCATCCGAAAGGCGCTTGAGACGAACGTTCTCTCCGTCGCGAAACAGCGGCTGGCCGACGTGCTCGAAGCCGAGCAGCGTGCCGTCGCCCCGCGCAATGCGAAGATCGTCGGGAAAATGACCTTCGATGACGCGCTGGCGATTTTCCAAGAGCGCCAGAAGCAGAGCACTGAACTCAAACCTCGCAGCGTGGACTACAACGAACGCGCCGCTGAGTGCCTGCTCAAGACTTGGCCGAGCTTGAAGGAAATGGACGTTCGGAAAATCACCAAAGCCGATTGCCTCCAGTGGCGTTCCGAGTTTGGGAAGAAGTATTCCGCGACTGTAACCAACGGCACCCTTTCGATTCTTCGTCGGGTTCTCGACATCGCGATTGAATCGGGAGTGCGCTACGACAATCCAGCCAAGGCAAAAGAGGTTCGCCGTGCTCGTGTCCGTCAGAAGGAACTGCGCCTGCCCGAGCCTGACCAGTTCATCGCCCTCGTCAAACACGTGCGCGGGAATGGCAGCGGCAAGGGTGGCCATTGCGCGGACACCATCGAGTTCTTTTCCTTCTGCGGGCCTCGCTTGAGCGAAGCCAAGGGAATCTTGGGCCGTGACTGCGACTTCACGCGCGGCGAAATCATCATTCGCGGCGATCCCGAAACCGGAACCAAGAATTGGGAGATGCGCCGTGTGCCGATGATTCCTGAAATGCGGACGCTCCTTGAGCGCCTGAAAGCCGAGCGCGGCGAACAGGACTTTCTCAAGAACCCCGTTTGCCGGGTTCGGAAGTTCAACCGCTCGCTCAAGAACGCCTGCAAGAAGCTCGGCCTGCATCATCTCACGCATCACGACCTGCGCCACCTGTTCGCCACCCGCGCCATTGAATCCGGCGTGCCGATTCCGACGGTCGCGAAGTGGCTCGGCCACAAAGATGGCGGTGTTCTCGCGATGCAGACCTACGGGCACTTGAGGGACAAGCACTCGGCAGACATGGCGCAGAAAGTCGTCTTTGCCGAAAGCCCGGCCAGCCCTGCCAACGTCGTGTCGCTTCCGCCCAAGCAGGAACGCCAAGATCAATCCGGTGTCGTTGACCAGAAGGCCATCGCGAAGGCCAAAGCGAAATACAAATACCCTTGGTGGGCATCCAACAACGCGCTCGAAATTTTTTGGGGCCAGGTCAATGAAGACGTGCGAATCGTTCCCTTCGAGAAATACCACGAAGCGGCCAAGGCAGCGATGGACCGGGAAGTCTTCGCGCATGAGTTTGCCGAGGCGCAAGCGTTGAGGGACGAGTTTATCGAGCGCACCGACAAGAACACCTTGGAGCAGCTTATGGCGAAAGTCCCCCACGACCTCGGAGCGGAAAAACAAGCCGCTGTGTGCTAA
PROTEIN sequence
Length: 528
MTTCSYMPENKGNREDCPELRTTDLIPQCDTVSVKAGNSKTKSLWTKAPVANLVRYEPSGIYFVRAKVRGKLIRKALETNVLSVAKQRLADVLEAEQRAVAPRNAKIVGKMTFDDALAIFQERQKQSTELKPRSVDYNERAAECLLKTWPSLKEMDVRKITKADCLQWRSEFGKKYSATVTNGTLSILRRVLDIAIESGVRYDNPAKAKEVRRARVRQKELRLPEPDQFIALVKHVRGNGSGKGGHCADTIEFFSFCGPRLSEAKGILGRDCDFTRGEIIIRGDPETGTKNWEMRRVPMIPEMRTLLERLKAERGEQDFLKNPVCRVRKFNRSLKNACKKLGLHHLTHHDLRHLFATRAIESGVPIPTVAKWLGHKDGGVLAMQTYGHLRDKHSADMAQKVVFAESPASPANVVSLPPKQERQDQSGVVDQKAIAKAKAKYKYPWWASNNALEIFWGQVNEDVRIVPFEKYHEAAKAAMDREVFAHEFAEAQALRDEFIERTDKNTLEQLMAKVPHDLGAEKQAAVC*