ggKbase home page

2019_SCN_bioreactor_t1_biofilm_scaffold_75520_19

Organism: 2019_SCN_bioreactor_t1_biofilm_Verrucomicrobia_66_15

near complete RP 50 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: comp(29393..31006)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBR1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 511.0
  • Bit_score: 737
  • Evalue 7.80e-210
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEF62946.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 511.0
  • Bit_score: 737
  • Evalue 1.10e-209
emrB; drug resistance transporter, EmrB/QacA subfamily similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 512.0
  • Bit_score: 654
  • Evalue 1.40e-185

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1614
ATGAGCCAGCCGCTGCACGGTCTCTACGGCTCCGACCGCCGCCTGCTCGGGCCACTGGCGCTGCGTCTCCACGATCGCGGCATGCTGAAGTGGGTGATCGCGATCACCGCGGCGCTCGGCGCGATCCTCGAGGTCATCGACACGAGTATCGTCAACGTCGCGCTGCCCGACATCCAGGGCAACCTCGGGGCGACGCTCTCCGAGGCCGGCTGGGTATCGACGGGCTACGCGTGTGCCAACGTCGTGATGATCCCGCTCACGGCCTGGTTGAGCGATCGCTTCGGCCGCAAACGCTACCTGCTGTTTTCGCTGACGGGCTTCACCGCGGCGTCGGTGCTCTGCGGGCTTTCGACCAGCCTCGGCATGCTCATCGTCGCGCGGGTGCTGCAAGGTTTCTGCGGCGGCGGTCTGATCGCCAAGGCGCAGTCGATCCTCTTCGAGACGTTTCCGAAGAAAGACCAGCCCGCCGCCCAGGCGCTCTTCGGTATCGGCGTCATCGCCGGACCGGCGATCGGGCCGGTCTTGGGCGGCTATCTGACCGACACGCTGGGTTGGCGCTGGATTTTTTTCATCAACCTTCCCGTCGGCATCTTCGCGGTGCTGATGACGATCATCTTTCTCCCGCGCGACACCCGGGGGCAGCTCCTGCATGCCTCGGTCGACTGGCTCGGGATCGGCCTGCTCGCCGTGGGGCTTGGCTGCTTTCAAACGATGCTCGAGGAAGGGCAGCAAAACGATTGGTTTGGCTCGCGTTTCATCGTGATGATGGCGGCCGGAGCGACGATCGGCGCGGCGCTCTTCATCTGGCGCGAACTGTCGACCGATCATCCCGCCGTCGATCTGCGCGTGCTGCGGCACAAATCCCTCGCGGCCGGCAGCGTGTATTCGCTCATCCTCGGTATGGGGCTTTACGGCGTGATGTTTGCCGTGCCCATTTTCGTGCAGGACTACCTGCACTTCACCGCGTTGCAGAGCGGCATGGTGCTGCTGCCCGGCGCGATCGCCTCGGCCGTCATGATGATCGTCATGGGCAAGGTCGCCGGGCGCGTCGATGCCCGCGTGCTCATCGCCTTGGGCGCGCTCACGCTCGTGAGCTGCGTCGTGCTGCTCTCGCGCATCAACCCCGATACGAGCACCACGACGCTGTTCTGGCCGCTCGTGCTGCGCGGACTCGGCACCGTGATGATGTTCCTACCGCTCAGTCTCGCCACGCTCGGCAGCCTGCCGAAGGGCGACGTAGCCGCCGGCTCCGGTTTCTACAACCTCACCCGCCAGATGGGCAGCAGCATCGGTATCGCGATCATCACGACGCTGCTCGCGCACCGCGAAGCCGTCCACCGCGCCGTCCTTGTGGAAAACGTGTCGGCCACGAATCCGGCGCTGTCTCCACGGATGGAGCTGCTCACCGGGAATTTTCTCCAGCACTCCGGCGATCCGGTGCAGGCGCATCATCAGGCGTTCGCCGTGATCGACCAGCTCGTCAACGCCCAGGCGCTGCTCCTCTCGTTCGCCGACGTGTTCTTCTACGTCGCCGCGACGTTCATCGTCACTCTGCCCATTCTCCTGCTGCTGGGCCAGGGCCGCAATCGCGACGCGGCTGCCGCCGCGCACTAA
PROTEIN sequence
Length: 538
MSQPLHGLYGSDRRLLGPLALRLHDRGMLKWVIAITAALGAILEVIDTSIVNVALPDIQGNLGATLSEAGWVSTGYACANVVMIPLTAWLSDRFGRKRYLLFSLTGFTAASVLCGLSTSLGMLIVARVLQGFCGGGLIAKAQSILFETFPKKDQPAAQALFGIGVIAGPAIGPVLGGYLTDTLGWRWIFFINLPVGIFAVLMTIIFLPRDTRGQLLHASVDWLGIGLLAVGLGCFQTMLEEGQQNDWFGSRFIVMMAAGATIGAALFIWRELSTDHPAVDLRVLRHKSLAAGSVYSLILGMGLYGVMFAVPIFVQDYLHFTALQSGMVLLPGAIASAVMMIVMGKVAGRVDARVLIALGALTLVSCVVLLSRINPDTSTTTLFWPLVLRGLGTVMMFLPLSLATLGSLPKGDVAAGSGFYNLTRQMGSSIGIAIITTLLAHREAVHRAVLVENVSATNPALSPRMELLTGNFLQHSGDPVQAHHQAFAVIDQLVNAQALLLSFADVFFYVAATFIVTLPILLLLGQGRNRDAAAAAH*