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2019_SCN_bioreactor_t2_biofilm_scaffold_68963_4

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(2009..3004)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase C (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 337.0
  • Bit_score: 434
  • Evalue 1.40e-119
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:ABI61480.1}; EC=4.2.1.70 {ECO:0000313|EMBL:ABI61480.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 337.0
  • Bit_score: 434
  • Evalue 7.20e-119
Pseudouridine synthase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUM2_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 337.0
  • Bit_score: 434
  • Evalue 5.10e-119

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Taxonomy

Granulibacter bethesdensis → Granulibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGACCGTCACCACCCGCGAAGTCACCAACGACGAGGCCGACATCCGGCTCGACCGCTGGTTCCGCCGCCACTTCCCCGGCCTCAGCCAGGGCGCCATCCAGAAATTCTGCCGCACCGGCCAGGTGCGCGTGGACGGCAAGCGCGTGGAGGCCGCCACCCGTCTCAACCCGGGCCAGACCGTCCGCGTCCCGCCCATCCCGGCCGCCCCCGCGCCGGCCAAGCTGGTGCATGAGCTGGACCCCCGCCTGGCCGCCGAAATGCGCGCCATGGTGCTGTATTCCGATGACGACCTGATCGTCCTGAACAAGCCGCAGGGCCTGCCCACCCAGGGCGGCCCCGGCATCTCCAAGCATGTGGACATGATGCTGGCCGCCCTGCGCGAGGGCATCGACCCCAAGCCCCGCCTAGTTCACCGGCTGGACCGCGAGACCTCGGGCGTGCTGGTGGTTGCCCGCACCCCCGGCGTCGCCGCCAAGCTCGCCGCCGCCTTTCGCGGCCGCGACGTGGAGAAGGTCTACTGGGCTATCGTCTGCGGCCGCCCGGTCCCAGTGGAAGGCCGGATCGATGTCGAACTGGTCCGCATCGACGGCTTCCGCGGCGAGCGCGCCGCCATCGCCGGCGCCTACGACACCGACACCGCGCGCGCCATCACCGACTACCGCACCCTCGATCATGCCGGCCGCAAGCTCGCCTGGCTGGAACTGCGCCCGCTCACCGGCCGCACCCACCAGCTGCGCGTCTCCTGCGCCAGCATCGGCGCGCCGATCCTGGGCGACCTGCCCTATGGCGAGGAACGCCCGGGCGAGGAGCGTCGCAACACCGCGCTGTATGAGGGCCTGGGCGAAACCCTGCACCTGCACGCCCGCCAGATCTCGCTGCCCCACCCCTCCGGCGGCCGACTGGTGGTGGAGGCCGACCTGCCGCCGCATATGGCCGACACCTTCCGCACCCTAGGCTTTACCGCCCCTCCGGCGGAGCGCCCGCTTCGCCGCTGA
PROTEIN sequence
Length: 332
MTVTTREVTNDEADIRLDRWFRRHFPGLSQGAIQKFCRTGQVRVDGKRVEAATRLNPGQTVRVPPIPAAPAPAKLVHELDPRLAAEMRAMVLYSDDDLIVLNKPQGLPTQGGPGISKHVDMMLAALREGIDPKPRLVHRLDRETSGVLVVARTPGVAAKLAAAFRGRDVEKVYWAIVCGRPVPVEGRIDVELVRIDGFRGERAAIAGAYDTDTARAITDYRTLDHAGRKLAWLELRPLTGRTHQLRVSCASIGAPILGDLPYGEERPGEERRNTALYEGLGETLHLHARQISLPHPSGGRLVVEADLPPHMADTFRTLGFTAPPAERPLRR*