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2019_SCN_bioreactor_t2_biofilm_scaffold_205439_16

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(22197..22778)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase beta chain {ECO:0000313|EMBL:CCU62712.1}; EC=1.13.11.3 {ECO:0000313|EMBL:CCU62712.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 188.0
  • Bit_score: 214
  • Evalue 8.90e-53
putative Protocatechuate 3,4-dioxygenase (EC:1.13.11.3) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 186.0
  • Bit_score: 199
  • Evalue 7.80e-49
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ65_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 188.0
  • Bit_score: 214
  • Evalue 6.30e-53

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAGCGAAACCGCCGACCTCAACCCCATCCTGGCCCGGCGCACGCCCGACCAGATCCTGGGGCCGTTCTTCCCGGTGACCCAGGCGCCGGACACCAGCGGCGACCTCACCCGGGGCGGGCGGGCGCAGGGCACCATCCTGTACCTGTCCGGCCGGGTCACCAACCTGGCCGGCGAGGCGGTGGCCGGCGCGCGGATGGAGATCTGGCAGGCCAACGCGCACGGCAAATATCTGCACCCGAATGACGACAATTCCGCCCCGATCGACCCGAATTTCGCCGGTTTCGCCCTGATTTTCACGGGGTCAGACGGCTCCTACGCGATCAAGACCGTCCGCCCGAAGGCCTACCCCACCAGCCCCACCACGGTGCGCCCCGCGCATATCCATTTCCGCGTGACCGGCGCCTTCGAGCAGTTCGTGACGCAGATGTATTTCCAGGGCGACCCCTGGAACGACCAGGACCCCTTCCTGCAAAGCGCCCGCCGCAAGGAGGCGCTGATCGTCGACCCGCATCCCGCCCCTCCCCCGGCCGAGCCGGGCGCGGAGGCGGCCAGCTTCGACATCGTGCTGGTACGCGGCTAG
PROTEIN sequence
Length: 194
MSETADLNPILARRTPDQILGPFFPVTQAPDTSGDLTRGGRAQGTILYLSGRVTNLAGEAVAGARMEIWQANAHGKYLHPNDDNSAPIDPNFAGFALIFTGSDGSYAIKTVRPKAYPTSPTTVRPAHIHFRVTGAFEQFVTQMYFQGDPWNDQDPFLQSARRKEALIVDPHPAPPPAEPGAEAASFDIVLVRG*