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2019_SCN_bioreactor_t3_planktonic_Azospirillum_lipoferum_68_106

Consensus taxonomy: Azospirillum lipoferum  →  Azospirillum  →  Rhodospirillales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying 45 items
contig # features sequence size GC content (%) Cov Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_115835
Species: Azospirillum lipoferum (84.57%)
337 365871 bp 67.59 95.34 88.11
2019_SCN_bioreactor_t3_planktonic_scaffold_9646
Species: Azospirillum lipoferum (83.49%)
315 340155 bp 67.12 92.31 88.05
2019_SCN_bioreactor_t3_planktonic_scaffold_63697
Species: Azospirillum lipoferum (85.94%)
313 313337 bp 67.65 102.46 89.46
2019_SCN_bioreactor_t3_planktonic_scaffold_58949
Species: Azospirillum lipoferum (79.58%)
289 301799 bp 67.83 114.70 87.61
2019_SCN_bioreactor_t3_planktonic_scaffold_73314
Species: Azospirillum lipoferum (81.31%)
289 294909 bp 67.49 94.99 88.77
2019_SCN_bioreactor_t3_planktonic_scaffold_57448
Species: Azospirillum lipoferum (78.74%)
254 332310 bp 68.03 108.96 91.08
2019_SCN_bioreactor_t3_planktonic_scaffold_27802
Species: Azospirillum lipoferum (85.06%)
241 249871 bp 67.34 111.42 84.92
2019_SCN_bioreactor_t3_planktonic_scaffold_14111
Species: Azospirillum lipoferum (87.5%)
224 260675 bp 68.25 111.30 90.02
2019_SCN_bioreactor_t3_planktonic_scaffold_55203
Species: Azospirillum lipoferum (70.51%)
156 170570 bp 68.03 111.97 92.45
2019_SCN_bioreactor_t3_planktonic_scaffold_74486
Species: Azospirillum lipoferum (86.76%)
136 172912 bp 68.27 102.90 90.95
2019_SCN_bioreactor_t3_planktonic_scaffold_11400
Species: Azospirillum lipoferum (87.69%)
130 139429 bp 68.40 106.00 88.50
2019_SCN_bioreactor_t3_planktonic_scaffold_26519
Species: Azospirillum lipoferum (84%)
125 132689 bp 67.69 108.24 88.08
2019_SCN_bioreactor_t3_planktonic_scaffold_135605
Species: Azospirillum lipoferum (88%)
125 117120 bp 67.33 101.77 89.02
2019_SCN_bioreactor_t3_planktonic_scaffold_48826
Species: Azospirillum lipoferum (82.79%)
122 133690 bp 68.64 109.32 89.15
2019_SCN_bioreactor_t3_planktonic_scaffold_35029
Species: Azospirillum lipoferum (62.93%)
116 127812 bp 68.06 110.89 89.62
2019_SCN_bioreactor_t3_planktonic_scaffold_62054
Species: Azospirillum lipoferum (80.17%)
116 123406 bp 68.39 113.01 89.03
2019_SCN_bioreactor_t3_planktonic_scaffold_46078
Species: Azospirillum lipoferum (92.38%)
105 119206 bp 68.76 105.44 89.42
2019_SCN_bioreactor_t3_planktonic_scaffold_78247
Species: Azospirillum lipoferum (58.16%)
98 120753 bp 67.93 105.26 92.15
2019_SCN_bioreactor_t3_planktonic_scaffold_65377
Species: Azospirillum lipoferum (84.69%)
98 121378 bp 68.04 114.45 87.52
2019_SCN_bioreactor_t3_planktonic_scaffold_13925
Species: Azospirillum lipoferum (90.63%)
96 102450 bp 68.36 107.82 90.88
2019_SCN_bioreactor_t3_planktonic_scaffold_36152
Species: Azospirillum lipoferum (79.79%)
94 111700 bp 68.29 101.03 87.12
2019_SCN_bioreactor_t3_planktonic_scaffold_53470
Species: Azospirillum lipoferum (83.87%)
93 98414 bp 69.21 108.48 91.17
2019_SCN_bioreactor_t3_planktonic_scaffold_103380
Species: Azospirillum lipoferum (83.52%)
91 110348 bp 67.92 112.29 89.11
2019_SCN_bioreactor_t3_planktonic_scaffold_22559
Species: Azospirillum lipoferum (82.14%)
84 88127 bp 68.60 109.81 87.88
2019_SCN_bioreactor_t3_planktonic_scaffold_31437
Species: Azospirillum lipoferum (82.72%)
81 88350 bp 66.80 96.63 88.10
2019_SCN_bioreactor_t3_planktonic_scaffold_69121
Species: Azospirillum lipoferum (76%)
75 101349 bp 67.32 118.58 89.83
2019_SCN_bioreactor_t3_planktonic_scaffold_44725
Species: Azospirillum lipoferum (84.38%)
64 71444 bp 67.53 96.81 90.34
2019_SCN_bioreactor_t3_planktonic_scaffold_4159
Species: Azospirillum lipoferum (76.56%)
64 75291 bp 68.39 106.25 90.30
2019_SCN_bioreactor_t3_planktonic_scaffold_32028
Species: Azospirillum lipoferum (90%)
60 77836 bp 68.58 104.86 91.48
2019_SCN_bioreactor_t3_planktonic_scaffold_18389
Species: Azospirillum lipoferum (93.22%)
59 70989 bp 67.93 104.55 92.44
2019_SCN_bioreactor_t3_planktonic_scaffold_103634
Species: Azospirillum lipoferum (81.82%)
55 65078 bp 68.70 114.01 88.09
2019_SCN_bioreactor_t3_planktonic_scaffold_109256
Species: Azospirillum lipoferum (92.73%)
55 65068 bp 67.52 94.17 88.73
2019_SCN_bioreactor_t3_planktonic_scaffold_132218
Species: Azospirillum lipoferum (81.63%)
49 63394 bp 68.11 116.09 90.82
2019_SCN_bioreactor_t3_planktonic_scaffold_11136
Species: Azospirillum lipoferum (86.96%)
46 44849 bp 67.44 114.80 85.52
2019_SCN_bioreactor_t3_planktonic_scaffold_117356
Species: Azospirillum lipoferum (93.02%)
43 45629 bp 67.61 104.07 84.96
2019_SCN_bioreactor_t3_planktonic_scaffold_20835
Species: Azospirillum lipoferum (86.49%)
37 41372 bp 66.10 114.04 90.19
2019_SCN_bioreactor_t3_planktonic_scaffold_22159
Species: Azospirillum lipoferum (56.25%)
32 33920 bp 67.77 105.17 90.66
2019_SCN_bioreactor_t3_planktonic_scaffold_33560
Species: Azospirillum lipoferum (70.97%)
31 35081 bp 68.61 107.62 90.08
2019_SCN_bioreactor_t3_planktonic_scaffold_25769
Species: Azospirillum lipoferum (62.5%)
16 17103 bp 64.28 101.43 83.90
2019_SCN_bioreactor_t3_planktonic_scaffold_62390
Species: Azospirillum lipoferum (78.57%)
14 12701 bp 65.66 100.88 87.99
2019_SCN_bioreactor_t3_planktonic_scaffold_5545
Species: Azospirillum lipoferum (92.31%)
13 15993 bp 64.83 100.21 89.78
2019_SCN_bioreactor_t3_planktonic_scaffold_94860
Species: Azospirillum lipoferum (80%)
10 11495 bp 66.41 109.68 88.73
2019_SCN_bioreactor_t3_planktonic_scaffold_62711
Species: Azospirillum lipoferum (100%)
7 7015 bp 68.01 119.62 90.02
2019_SCN_bioreactor_t3_planktonic_scaffold_102387
Species: Azospirillum lipoferum (100%)
6 6516 bp 68.78 109.25 85.91
2019_SCN_bioreactor_t3_planktonic_scaffold_133833
Species: Azospirillum lipoferum (66.67%)
3 5709 bp 70.78 98.61 89.70
Displaying 45 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.