ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_16571_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(2882..3577)

Top 3 Functional Annotations

Value Algorithm Source
Oligogalacturonate-specific porin protein KdgM n=2 Tax=Klebsiella RepID=J6IR12_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 231.0
  • Bit_score: 478
  • Evalue 3.70e-132
porin similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 484
  • Evalue 1.10e-134
Oligogalacturonate-specific porin {ECO:0000313|EMBL:EWF63983.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 484
  • Evalue 5.50e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGTTCGCAAGATCTCTGGCCCTTGCTGCACTCTGTGGCATGTCTTTCGCGGCTTCAGCCGTCACGGTAGATTTACGTCACGAATTCATTGACGGCGGCAAATCGGATAAGAGCAACGCCGACCGCGTCTCCGTCTCCCATCGTTTCGCTAACGGCTTTGGCTTCTCCGTTGAGGCGAAGTGGAAGTCGGGCGGCGATAACACCAGCCAGCCTTATTCAGATTTCGTCGGTAATGGTCATGAAGAGAGCATTACCTGGCAGTGGAAGGCGAATAAAAACTTCTCGGTCACGCCGGGGTTCAATATTGAAAGTAACGATAGCCGCTCGATCTACAAGCCAAACCTGCGCGTGCAGTACAGCTTCGATAATGGCTTCTACGTCGCCGCCCGCTATCGTTACGACTATACCCGCTACCCGGCGAATGCAGGGAAAGATGATGACAAAGTTAACCGCGGCGATGCGTGGGCCGGTTACGTCTTCGGCGACTGGCGTACGGAGCTGAACTACGTTTATGCGCGCAGTACCGAAGGGGTTAAGCGCAACGACAACAAACCGTACTCGCAGGAGTACAACCTCAAGGTTGCCTACAAGCTGGATAAAAACTGGGCGCCGTACGGCGAGCTCGGCAACGTTGGCGTCAACGATCGCAGCGACCGCCAGACCCGTTTCCGCGTAGGTGTTGCCTACTCCTTCTAA
PROTEIN sequence
Length: 232
MFARSLALAALCGMSFAASAVTVDLRHEFIDGGKSDKSNADRVSVSHRFANGFGFSVEAKWKSGGDNTSQPYSDFVGNGHEESITWQWKANKNFSVTPGFNIESNDSRSIYKPNLRVQYSFDNGFYVAARYRYDYTRYPANAGKDDDKVNRGDAWAGYVFGDWRTELNYVYARSTEGVKRNDNKPYSQEYNLKVAYKLDKNWAPYGELGNVGVNDRSDRQTRFRVGVAYSF*