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2019_SCN_bioreactor_t3_planktonic_scaffold_62647_25

Organism: 2019_SCN_bioreactor_t3_planktonic_Klebsiella_oxytoca_56_23

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 ASCG 13 / 38 MC: 3
Location: comp(26972..28405)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 477.0
  • Bit_score: 930
  • Evalue 1.20e-268
RNA polymerase sigma-54 factor n=4 Tax=Klebsiella RepID=I6WUW9_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 477.0
  • Bit_score: 930
  • Evalue 4.30e-268
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 477.0
  • Bit_score: 930
  • Evalue 6.00e-268

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAGCAAGGTTTGCAATTAAGGCTAAGCCAACAGCTTGCCATGACGCCACAACTGCAGCAGGCGATTCGTCTACTGCAGCTGTCCACGTTAGAACTCCAGCAAGAACTCCAGCAGGCGCTGGACAGCAACCCGTTGCTGGAGCAAACCGATCTTCACGATGAGGTAGAAACCAAAGAGGCCGAAGATCGTGAGTCTCTGGATACCGTCGACGCCCTTGAGCAGAAAGACATGCCCGAAGAGCTGCCGCTTGATGCCAGCTGGGATGAGATTTACACCGCCGGAACGCCGTCAGGGAACGGCGTTGATTACCAGGATGATGAACTGCCCGTCTACCAGGGCGAGACCACGCAAAGCCTGCAGGATTATCTGATGTGGCAGGTTGAACTGACGCCCTTCACCGATACCGATCGCGCGATCGCGACCTCTATCGTCGATGCCGTTGATGATACTGGCTACCTGACCGTTCCTGTCGAAGACATCGTGGAAAGTATTGGCGATGATGAAATCGGGCTTGAAGAAGTAGAAGCGGTTCTCAAGCGCATTCAGCGTTTCGATCCCGTCGGCGTGGCGGCAAAAGATTTACGCGATTGCCTGCTGGTGCAGCTTTCACAGTTTGCCAAAGAGACGCCGTGGATTGATGAAGCTCGCCTGATCATCAGCGATCACCTTGATCTGCTTGCCAATCACGACTTCCGTAGCCTGATGCGCGTGACCCGCCTCAAAGAAGACGTGCTAAAGGAAGCAGTAAATCTGATCCAATCGCTGGATCCGCGCCCGGGCCAGTCGATCCAGACTGGCGAGCCAGAATATGTCATTCCTGACGTTCTGGTGCGTAAAGTGAACGATCGTTGGGTCGTTGAGCTCAATTCAGATAGCCTTCCGCGCCTGAAGATCAACCAGCACTATGCCGCCATGGGTAACAGTACGCGCAATGACGCTGACGGCCAGTTTATCCGCAGCAACCTGCAGGAAGCGCGCTGGCTTATCAAGAGCCTCGAGAGCCGCAACGACACCCTTCTGCGCGTCAGCCGCTGCATTGTCGAACAGCAGCAGGCTTTTTTTGAACAAGGTGAAGAGTTTATGAAACCGATGGTGCTGGCGGACATCGCTCAGGCCGTCGAAATGCATGAATCCACCATTTCACGCGTTACTACGCAAAAATACCTGCACAGTCCGCGCGGTATTTTTGAGCTGAAGTATTTCTTCTCCAGCCATGTAAACACCGAAGGCGGCGGCGAAGCATCGTCGACGGCCATTCGTGCGCTGGTGAAGAAATTAATCGCCGCGGAAAACCCCGCGAAACCATTGAGTGACAGTAAGCTCACCACCCTGCTATCCGATCAGGGTATTATGGTGGCGCGGCGAACCGTTGCTAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAATCAGCGTAAGCAGCTGGTTTGA
PROTEIN sequence
Length: 478
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALDSNPLLEQTDLHDEVETKEAEDRESLDTVDALEQKDMPEELPLDASWDEIYTAGTPSGNGVDYQDDELPVYQGETTQSLQDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTVPVEDIVESIGDDEIGLEEVEAVLKRIQRFDPVGVAAKDLRDCLLVQLSQFAKETPWIDEARLIISDHLDLLANHDFRSLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKVNDRWVVELNSDSLPRLKINQHYAAMGNSTRNDADGQFIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEEFMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTTLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV*