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2019_SCN_bioreactor_t3_biofilm_scaffold_40905_14

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 11028..12239

Top 3 Functional Annotations

Value Algorithm Source
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 403.0
  • Bit_score: 795
  • Evalue 3.30e-227
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17 6.1.1.24) similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 404.0
  • Bit_score: 695
  • Evalue 5.50e-198
glutamyl-tRNA synthetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4571C similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 404.0
  • Bit_score: 705
  • Evalue 1.90e-200

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCCCGTCGTCACGCGCTTCGCACCATCGCCCACCGGGCGGCTCCATGTCGGCAATATCCGCACGGCGCTGCACAACTGGCTGCTGGCCAAGCGCCACGGCGGCCGCTTCCTCCTGCGCATCGACGATACTGACGCCGAGCGCAGCCGCGAGGAGCATGTGGAGGCGATCCGCGCCGATCTGGCCTGGCTTGGGCTGCATCCCGAAGGCGAGGAACGCCAGTCCGCGCGCTTCGCGATCTACGAGGCGGCGTTCGACCGGCTTGTCGAGGCGGGGCGTCTCTATCGCTGCTATGAAACCGCGCAGGAACTCGATCTCAAGCGCAAGGTCCTGCTCGGGCGCGGCCTGCCGCCGATCTACGACCGCGCCGCGCTGCGCCTTACCGAAGCCGACCACGCGGCGAAGGCGGCAGCGGGCGAAAAGCCGCACTGGCGCTTCCTGCTGGACCACGACACGCCGATCGAATGGAACGACGGCATCCGCGGTCCGCAGCACTTCGATCCGCGCCAGATGTCGGACCCGGTGGTGCGCCGCGCTGACGGATCGTGGCTCTACATGCTGCCGAGCGCGATCGACGATGCCGCCATGGGCATTACCGACGTGCTGCGTGGCGAGGACCACGTCTCCAACACCGCCACGCAGATCCAGATGTTCCGCGCTCTGGGGGCCGAGCCGCCGCGCTTTGCCCACGCCGCGCTGCTGACCGGCACCGAAGGCAAGCTCTCCAAGCGGCTGGGCTCGCTGGGCGTCGCCGACCTGCGCGAAGCGGGGATCGAGCCGGAGGCCCTGATCGCCATGCTGGCGCGGCTGGGGACGTCGGACCCGATCGATCCCGCACTGGATGCCGATGCCCTGGCCGCCGCGTTCGACCTTTCCCGGTTCGGCCGCGCGCCCGCGCGGTTCGACGATGCCGAACTGCACCGCATCAACGCCGCCGTGGTCCATCGCCTGCCCTTCGCGCGCGTGGCCCATCTCCTGCCCGAAGGCATGACCGAGACGGCCTGGGAAGCGATCCGCCCCAACCTGGCCCATATCGGCGAAGTGGCCGACTGGTGGCGCGTGGTGACCGGGCCGATCACTGCCCCCGAGGCCGACCCCGAGACGCGGGCCTTTCTCGATCAGGCGGCGACGGTCGCCGCCGGGATCGACTGGGCGTCCGACCCCTGGAGCGCGTTGACGGCGACGCTCAAGGACGCGACCGGGCGCAAGGGC
PROTEIN sequence
Length: 404
MPVVTRFAPSPTGRLHVGNIRTALHNWLLAKRHGGRFLLRIDDTDAERSREEHVEAIRADLAWLGLHPEGEERQSARFAIYEAAFDRLVEAGRLYRCYETAQELDLKRKVLLGRGLPPIYDRAALRLTEADHAAKAAAGEKPHWRFLLDHDTPIEWNDGIRGPQHFDPRQMSDPVVRRADGSWLYMLPSAIDDAAMGITDVLRGEDHVSNTATQIQMFRALGAEPPRFAHAALLTGTEGKLSKRLGSLGVADLREAGIEPEALIAMLARLGTSDPIDPALDADALAAAFDLSRFGRAPARFDDAELHRINAAVVHRLPFARVAHLLPEGMTETAWEAIRPNLAHIGEVADWWRVVTGPITAPEADPETRAFLDQAATVAAGIDWASDPWSALTATLKDATGRKG