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2019_SCN_bioreactor_t3_biofilm_scaffold_106449_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1875..2123

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B389F1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 63.0
  • Bit_score: 58
  • Evalue 3.30e-06
Uncharacterized protein {ECO:0000313|EMBL:GAO55049.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 88.0
  • Bit_score: 112
  • Evalue 2.70e-22
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 80.0
  • Bit_score: 56
  • Evalue 2.70e-06

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGTCCGATTTCATGTCGTCCGCGTTTTGCGGAAGCCTTTCGCGCGCCCGTGCCACGGCTTCGGTCAGCTTCGTTGCGCTCGCCGCCGCGCCTGCCGCCTGGGCGGCCGAGGCCGATGCGCCAACGGACAGCGCCGCCGCGCCCAACGCCGAAGCCGCCGCCGAAGCCGCCGATGCCGGCAACGAGATCATCGTCACCGCGCGCCACCGCGAGGAGCGGTTGCAGGACGTACCGCTCGCCATCTCCTCG
PROTEIN sequence
Length: 83
MSDFMSSAFCGSLSRARATASVSFVALAAAPAAWAAEADAPTDSAAAPNAEAAAEAADAGNEIIVTARHREERLQDVPLAISS