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2019_SCN_bioreactor_t3_biofilm_scaffold_243871_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1510..2346

Top 3 Functional Annotations

Value Algorithm Source
Phytoene synthase {ECO:0000313|EMBL:GAO55494.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55494.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 281.0
  • Bit_score: 521
  • Evalue 3.70e-145
Squalene synthase HpnD n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 271.0
  • Bit_score: 406
  • Evalue 1.30e-110
squalene synthase HpnD similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 274.0
  • Bit_score: 347
  • Evalue 3.30e-93

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGAGCGACGGTACCGCCGTCAATGCCGCGCCTGCGGCCGCGCGCAGTTCGTTCTATGCCGGGATGCGCGTGCTGCCCAAGGCCGAGCGAGAGGCGATGTACGCGGTCTATGACTTCTGCCGGATCGTGGACGACATCGCCGACGACCAGCAGGGCGACCGGGCCGCGCGCAGGACGCAGCTCGACCAGTGGCGGCACGATCTCGATGCGCTCTACGCCGGCGGCGAGGCCGGGCAGGCGGCGTTCCTGACCGAACCGGTGCGGCGGTTCGCGCTGGAGCGGGCCGACTTCGAGGCGGTGATCGACGGCATGGCTACCGATGTCGATCACGATGTTCGCTGGCCGTCGGAAGCGGAACTCGACCTCTATTGCGACCGCGTTGCCTCGGCGGTGGGGCGGCTTTCGGTCCATATCTTCGGCATGGAACACGAACCGGGTGTGGCATTGGCGCACCATCTTGGCCGGGCACTGCAATTGACCAACATCCTGCGTGACATCGACGAGGATGCCGCGATCGGCCGCGTCTATATTCCCGCCGAAGCGCTGGCCGAAGCGGGGATCGTGCCGGAAACGCCGCTGCAGGTCGCCGCCGATCCACGTATGGACGTGGCGGCGCGGCGCGTGGCGGCGCGGGCGCACCGGCATTATCGCGAGGCGGCGGCCCTGCTGGCGACCAAGCCCAAAGGGCACCTGATTGCGCCGCGTCTGATGGAACACGCCTACGCGGGCGTGCTGCGGCGGATGGAGCACGTCGGCTGGGCGCCGCCGCGCCGGCGCGTGCGGACCAACAAGCTGGCGGTGATCTGGACCGTACTGCGCCTGCTGGTGATGGGATGA
PROTEIN sequence
Length: 279
MSDGTAVNAAPAAARSSFYAGMRVLPKAEREAMYAVYDFCRIVDDIADDQQGDRAARRTQLDQWRHDLDALYAGGEAGQAAFLTEPVRRFALERADFEAVIDGMATDVDHDVRWPSEAELDLYCDRVASAVGRLSVHIFGMEHEPGVALAHHLGRALQLTNILRDIDEDAAIGRVYIPAEALAEAGIVPETPLQVAADPRMDVAARRVAARAHRHYREAAALLATKPKGHLIAPRLMEHAYAGVLRRMEHVGWAPPRRRVRTNKLAVIWTVLRLLVMG*