ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_32106_3

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: 5595..6581

Top 3 Functional Annotations

Value Algorithm Source
fimbrial protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B0E96 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 328.0
  • Bit_score: 627
  • Evalue 5.30e-177
Uncharacterized protein {ECO:0000313|EMBL:EDL61195.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 323.0
  • Bit_score: 412
  • Evalue 2.90e-112
prepilin-type N-terminal cleavage/methylation domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 323.0
  • Bit_score: 205
  • Evalue 1.40e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gimesia maris → Gimesia → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 987
ATGAAAAAACTGCGTGGCTTTACCTTGATTGAACTTTTGGTCGTGATCGCGATTATCGCCGTTCTGATCGCATTGCTGTTACCTGCCGTGCAACAAGCACGCGAAGCAGCCCGGCGAACGCAGTGCAAGAACAACCTGAAGCAGCTGGCGCTCGCCATGCACAACTACGCCAACGACTATGGAATGCTGCCAATTCCTGACATTGGAATCACGTTCGCGCCCCGAACGCCGACTCACTGGGACATGAGCTGGGGGATCTCCCTCTTACCACAGTTGGACCAAGCACCTCTGTTCAACTTGCTCAATCAAAGTGCTCCGAACGGCGTTTCTGACGCCGCGAACCAGCCGGTGGTTTCGACCAGCCTGGCCGCGTTTGTTTGCCCCACAACGCCCCGAAGCGGTCTGATTCAAGGCATTATCGAAGTCCAAGATCCCATCGCAACGGCGGTCGTCAACACAACCTTCCGAGCGGCTCCCAGTGATTACCTGATCCCTCGTAGCTTCCAGGATTCGGCCTTCACACCGACTGAGGTCTTCGGCGCCTTTTGCTATGCCAACGGTTCGGGCACTCTCGATCAAACGCGAGCTGGCGCAAGGTTTCAAGATATCACGGACGGCCTTTCCAACACGATTCTACTTGTAGAGCGAGCGGGATTTCCCACATTGCTGGTTTCACAAGGCGGGGTGACTAAAGCCCCGACCGCGTCAACATTCCCCGCTGTCGTCCAAAAACACTTCAACGGGTGGTGGGCGTCGACACAAAACGATCGCGTCCGAGCTTGGAATGCCCAGGGGACGACCTATGGTGCTGGCCCCTGTGTGATCAATTGCTCAAATGATTGGGGGGGAGCATACTCGTTCCACACGGGCGGGATGCAGTCGCCACTGGCAGACGGTTCCGTTCGATTCTTGAACGCAAACCTCGATAAGGGGGTATTTCGTGCACTAATCGGGAAGAGTGATGGGATTGTCGTTGGCGAATTCTAA
PROTEIN sequence
Length: 329
MKKLRGFTLIELLVVIAIIAVLIALLLPAVQQAREAARRTQCKNNLKQLALAMHNYANDYGMLPIPDIGITFAPRTPTHWDMSWGISLLPQLDQAPLFNLLNQSAPNGVSDAANQPVVSTSLAAFVCPTTPRSGLIQGIIEVQDPIATAVVNTTFRAAPSDYLIPRSFQDSAFTPTEVFGAFCYANGSGTLDQTRAGARFQDITDGLSNTILLVERAGFPTLLVSQGGVTKAPTASTFPAVVQKHFNGWWASTQNDRVRAWNAQGTTYGAGPCVINCSNDWGGAYSFHTGGMQSPLADGSVRFLNANLDKGVFRALIGKSDGIVVGEF*