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2019_SCN_bioreactor_t3_planktonic_scaffold_102950_1

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(2..895)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 297.0
  • Bit_score: 455
  • Evalue 3.50e-125
2-isopropylmalate synthase n=1 Tax=Schlesneria paludicola RepID=UPI000299F939 similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 298.0
  • Bit_score: 575
  • Evalue 1.70e-161
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 297.0
  • Bit_score: 455
  • Evalue 7.10e-126

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Taxonomy

Planctopirus limnophila → Planctopirus → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 894
ATGTCCGACAACGTCATTATCTTCGACACCACGCTTCGCGATGGTGAACAGTCACCCGGTTGCAGCATGACAACGCCTGAAAAGCTGAAAATCGCGGAAGCGCTGGTCGAACTGGGCGTGGACGTGATCGAAGCCGGCTTTCCCATTGCATCGCCCGGGGATTTTGAAGCTGTGCGAGCCGTGGCGCAGCGATTCGGCGATCGAGCAAAAATCTGTGGATTGGCTCGTTGCCGTCGTGATGATATCGAACGGGCAGGGGAGGCACTTCGCGGGGTCGCGAAATCGCGAATTCACGTATTTTTGGCAACCAGTCCGATCCATCGCCAATTCAAATTGAAGATGGCCGAGCAAGAGATTGTCAAAGCGGCCGTCGAACATGTGAAACTGGCGCGGTCATTGTGTGAAGACGTCGAGTTTTCACCGGAAGATGCCGCTCGCACAGAATTGGACTTCTTGGTTGAGGTCGTTGAGAAGGCGATCGAGGCCGGTGCGACGACGGTGAATATTCCCGATACGGTCGGGTACGCCACGCCGACGCACTATTTCAAAGTCATTTCGCACCTCAAGCAGCACGTTTCGAACATCGATCGTGCCATCATCAGCACGCACTGTCACAACGATCTTGGACTCGCGGTTGCGAATAGTTTGGCCGCTGTCGAAGCGGGTGCCCGCCAGGTCGAGTGTACGATCAATGGGTTGGGTGAACGGGCAGGCAACGCCGCGCTTGAAGAGATCGTGATGGCGCTCAAAACGCGTCATGACTATTACGGCGTGACGACAAACATCAATACGCCGAAGTTGTGTGGTCTTAGCCGGCTGGTTTCGAGCACGACCGGGATGCTCGTTCAACGCAATAAGGCGATCGTGGGTCAGAATGCATTTGCCCACGAAGCG
PROTEIN sequence
Length: 298
MSDNVIIFDTTLRDGEQSPGCSMTTPEKLKIAEALVELGVDVIEAGFPIASPGDFEAVRAVAQRFGDRAKICGLARCRRDDIERAGEALRGVAKSRIHVFLATSPIHRQFKLKMAEQEIVKAAVEHVKLARSLCEDVEFSPEDAARTELDFLVEVVEKAIEAGATTVNIPDTVGYATPTHYFKVISHLKQHVSNIDRAIISTHCHNDLGLAVANSLAAVEAGARQVECTINGLGERAGNAALEEIVMALKTRHDYYGVTTNINTPKLCGLSRLVSSTTGMLVQRNKAIVGQNAFAHEA