ggKbase home page

2019_SCN_bioreactor_t3_planktonic_scaffold_100127_2

Organism: 2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Location: comp(1053..2897)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UNM1_RHOBA similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 646.0
  • Bit_score: 371
  • Evalue 1.30e-99
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 646.0
  • Bit_score: 371
  • Evalue 3.60e-100
Membrane protein containing von Willebrand factor, type A domain protein {ECO:0000313|EMBL:EMI28625.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 648.0
  • Bit_score: 371
  • Evalue 1.80e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula europaea → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1845
CTCATTGTGCCCATTGTGATTCTCTACATTTTGAAAGTTCGGCTGCGCCGTGTTCCCGTTTCCACGACGATGTTTTGGCGGCAGATTTTTGAAGAGAAGCCGCCGCGCAGTCTCTGGGAAACCTTAAAGCACCTGATGTCGCTGCTGGCGCAGCTCGCGATGTTGCTGCTGCTGGTGCTCGCACTGACAGAGCCTTATTTTTCTTGGGAAGTTCTGGCCGCTCGGAGAATCGTGCTGGTTGTCGACAATTCAGCAAGCCTCAAGGCCACCGATGTCGCGCCAACTCGATTCGCACAAGCCATCAATCGTGGCCTAGGCATTATTGATGGCCTGCGTGCGCGTGATGAGCTGGCGATCGTCGTTGCCGGAACGGAACCAACCGTTGCATGTGGAATGACGGGGCATCTTCAAACCCTAAAAACGGCACTGACCTCGATTCCACAAACAGATGGTCCCACCGAGCTTCGGGAAGCGGTCGGGCTTGGACGCAAACTGATTGGCAATCATCCTCATGGAAAAGTCATCGTCTTGACCGACGGATGCTGTCCCGAGGCCGCTGAACTGGCGGCCAACGAGGCCGTGGACCTGCAGTTGATCGGTGGACGCGCTGGCAACTTGGGGATCACTCGATTTCAAGTTCGCCGCAGTCTGCTGGATTCTTTGGGTTACGAGATTCTTGTCGAAGTATTGAATGCGTCGGATGGCATCGTCGAATGTCGAATGGAAATGGACCTCGACGGTGTTCCCGTGGATGTCTTGCCTCTCAAATTGCAACCAGGACAAACCTGGGCGCAAACTCTCGAGAAAACTTCTCTGAAAGGGGGCCACCTTTCAGCCAAGCTGATGTATGAGGATCCGTTTCCGGTCGACAATCAGGCGTGGGCGATTCTGCCTGCTCGAAACGCTCAACCCGTCTTGATTGTGACACCCGGCAACCTCTTTTTACGGAAGGTCTTCGAGGCCAATCCGTCCATGGTTGTGACGGTCGTGCCAGAACTTCCGGCCGTGATCAATCCCGGGACGTTGGTCGTTCTGCATCGGCACGTTCCCGAAAAACTTCCGGCGGGGCCCGTATTTGTCGTCGACCCTCAAGAGAAGTGTGAGTTTTGGGACGTGGGCGAAGAACTGGGCGCACCTTTGATTACTCAACAGGCGACCGATTCGCCGCTGATGGCCCACGTGCGACTCGACAACGTTCAGATGCCGACCGCCCAGCAATTGAAATTCCATCAACCCGTTCAGGTGCTGGCGGGTGCACTGACCGGAGATCCGATCTTCGCGGCGATGACGCGTCCCACGGGAAAGATCCTTGTTCTTACGGGCAATCTTGATGAGGGGGACTTGGCGTTCCGAACGGCGTTTCCCATTCTCGTGGCAAACTCGATTGGATGGTTCAATTCGAATATCGGAGAGTTGCGCGAATCTCTCTCGTCTGGAAGTACGACCGAGATCGACTTGTCTGCAAGCAAGCCTGAAATGCAGGGCAGAACGAACGCGACTCAAGTTGGATTCTCTCTTGTGCCACCTCAGGGTGCCGCAAGGCGATTGCCTGCTGACGTCGAAAAAGCCACCGTTGGACCATTGGAAACGTGTGGAATTTGGAAGGTCATTCCAATGGAGAAATCTGCATCGAAGCCAGCCGACCCGATCTTGGAACTGGCGTGTAATCTTGCGAATGCAGTGGAGACAGACCTGCGGACCCCTGAGCTTACGAACCTGCAGGCGAAGCCCTCGCAATTTACGTCCGGCTGGTTTAGCCGGCCCATGTGGTTCTATCTGGTCGTTTTGGCTTGGCTGATGGCAACGATTGAATGGTTCTTGTACCAGCGTCGTTACCTATCGTAA
PROTEIN sequence
Length: 615
LIVPIVILYILKVRLRRVPVSTTMFWRQIFEEKPPRSLWETLKHLMSLLAQLAMLLLLVLALTEPYFSWEVLAARRIVLVVDNSASLKATDVAPTRFAQAINRGLGIIDGLRARDELAIVVAGTEPTVACGMTGHLQTLKTALTSIPQTDGPTELREAVGLGRKLIGNHPHGKVIVLTDGCCPEAAELAANEAVDLQLIGGRAGNLGITRFQVRRSLLDSLGYEILVEVLNASDGIVECRMEMDLDGVPVDVLPLKLQPGQTWAQTLEKTSLKGGHLSAKLMYEDPFPVDNQAWAILPARNAQPVLIVTPGNLFLRKVFEANPSMVVTVVPELPAVINPGTLVVLHRHVPEKLPAGPVFVVDPQEKCEFWDVGEELGAPLITQQATDSPLMAHVRLDNVQMPTAQQLKFHQPVQVLAGALTGDPIFAAMTRPTGKILVLTGNLDEGDLAFRTAFPILVANSIGWFNSNIGELRESLSSGSTTEIDLSASKPEMQGRTNATQVGFSLVPPQGAARRLPADVEKATVGPLETCGIWKVIPMEKSASKPADPILELACNLANAVETDLRTPELTNLQAKPSQFTSGWFSRPMWFYLVVLAWLMATIEWFLYQRRYLS*