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cn_combo_scaffold_16_5

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4057..4965)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 301.0
  • Bit_score: 601
  • Evalue 6.90e-169
Diaminopimelate epimerase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QZX0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 301.0
  • Bit_score: 601
  • Evalue 4.90e-169
Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 299.0
  • Bit_score: 509
  • Evalue 7.20e-142

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGTCGGATCGGGTCGAATTCGCAAGGATGAACGGGCTTGGCAACAAGATCCTGGTCGTCGACATGCGCGGTCGCACCGATAGGGTGACGCCGACTGCGGCGATTGCGCTCGCCGCCGACCCCGCGACCGCTTTCGACCAGATCATGGCCATCCATGATCCGAAGGTCGATGGCACCGACGCCTATATCGACATCCTGAACTGCGACGGCTCGAAGGCCCAGGCTTGTGGCAATGGCACCCGCTGCGTGGTGCAGGCGCTTGCCAGTGAAACCGGCCGCAAGAGCTTCACCTTCCAGACCATTGCCGGGATCCTGAACGCTGTCGAACATGCTGACGGCACGATCTCCGTCGACATGGGCAAGCCGGTCTTTGCCTGGGACAAGATCCCGCTCTCGGAAGAATTCCACGACACCAGCCGCATCGAGCTGCAGATCGGCCCGATCGACGCCCCGATCCTGCATTCGCCCTCGGCCATGTCGATGGGCAATCCGCATGCCGTGTTCTGGGTTGATCGCGATCCGATGACCTATGATCTGGAACGCTTCGGTCCGCTCCTCGAAAACCATCCGATCTTCCCGGAAAAGGCCAATATCACCCTGGCCCAGGTCACCTCGAAGACATCAATGGTAACACGCACCTGGGAACGCGGCGCCGGCCTGACGCTCGCCTGCGGCTCTGCCGCCTGCGCCGCTGGCGTTTCCGCCGCCCGCACCGGTCGCACCGAGCGCAAGGTGACGATCACGGTGGCGTCGAGCCCCAATCGCGGTACGCTCACAATCGACTGGCGTCCCGATGATAAGGTCGTCATGACCGGCCCCGCCGAATGGGAATGGTCCGGCATGGTTGATCCGGCAACCGGCAGCTGGCAGCGCGACGAGAGCAGCCAAGCAGAGGCCGCCACCCAGTGA
PROTEIN sequence
Length: 303
MSDRVEFARMNGLGNKILVVDMRGRTDRVTPTAAIALAADPATAFDQIMAIHDPKVDGTDAYIDILNCDGSKAQACGNGTRCVVQALASETGRKSFTFQTIAGILNAVEHADGTISVDMGKPVFAWDKIPLSEEFHDTSRIELQIGPIDAPILHSPSAMSMGNPHAVFWVDRDPMTYDLERFGPLLENHPIFPEKANITLAQVTSKTSMVTRTWERGAGLTLACGSAACAAGVSAARTGRTERKVTITVASSPNRGTLTIDWRPDDKVVMTGPAEWEWSGMVDPATGSWQRDESSQAEAATQ*