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cn_combo_scaffold_16_10

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(7607..9445)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 612.0
  • Bit_score: 1198
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QZX8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 612.0
  • Bit_score: 1198
  • Evalue 0.0
thiC; thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 610.0
  • Bit_score: 1112
  • Evalue 0.0
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGAACATTGCCCCTAACTTCCCAAAGCCCGACGTCACCACCGGGCCGCTTCCCGCCTCGACCAAGATCTTCTTAGCAGGAGACATGCATCCGGACATTCGCGTACCCCTGCGCCAGATCGCGCTGCACCCGACTTCGGGCGAACCACCGGTTAATGTCTACGATTCCTCAGGTCCCTACACAGATCCGCTGGCAACCATCGCAATCGATCAAGGCCTTGCCCGCCGCCGTCTGGATTGGGTCAGGCAGCGCGGCGATGTGGAGGCCTATGACGGCCGCGATGTAAAGCCAGAGGACAACGGCTTCGTCTCCGCAGAGAAACTCACGCCGGCGTTTCCCGTGAAACATCAGCCGCTTCGCGCAACGGGCGGCAAGGCCGTCACACAGCTCGCCTATGCCCGCGCCGGCATCATCACGCCGGAAATGGAATATGTGGCGATCCGCGAAAACCTTGGCCGCAAGGCCATGAAAGAAGCGCTCATCCGCGACGGCGAAAGCTTCGGCGCCGCGATCCCCGATCACGTGACGCCGGAATTCGTCCGCCAAGAGATCGCTCTGGGCCGGGCAATCATTCCCGCCAACATCAACCATCCCGAACTGGAGCCTATGATCATCGGCCGGAATTTCCTGGTGAAGATCAACGCCAATATCGGCAACTCGGCCGTCACCTCCTCCATGGCTGAGGAAGTCGAGAAGATGGTCTGGGCGATCCGCTGGGGCGCCGACACGGTCATGGATCTCTCGACCGGCCGCAACATTCACAACATCCGCGACTGGATCCTGCGCAATTCACCCGTGCCGATCGGCACCGTGCCGCTCTACCAGGCGCTGGAAAAGGTCGGCGGCATTGCCGAGGATCTGACCTGGGAGGTCTATCGCGACACGCTGATCGAACAGGCCGAGCAGGGCGTCGACTACTTCACCATCCATGCCGGCGTGCGACTGCATTACATCCCGCTGACCGTCAACCGCGTCACCGGCATCGTTTCGCGCGGTGGTTCGATCATGGCCAAGTGGTGTCTGCATCATCACAAAGAGAGCTTCCTCTACGAGCATTTCGAGGAAATCTGCGACATCTGCCGCGCCTACGATGTCTCCTTCTCGTTGGGCGATGGCTTGCGCCCCGGCTCGATTGCCGATGCCAATGATGCCGCCCAGTTTGCCGAGCTGGAGACGCTGGGTGAGCTGACCAAGATTGCCTGGGAGAAAGATTGCCAGGTGATGATCGAAGGTCCCGGCCATGTTCCCATGCACAAGATCAAGGAAAACATGGACAAGCAGCTGAAGACCTGCGGCGAGGCCCCCTTCTACACGCTGGGGCCGCTGACGACGGATATCGCGCCGGGTTACGACCACATCACCTCGGGCATTGGGGCGGCGATGATCGGCTGGTTCGGCACGGCCATGCTCTGCTACGTCACGCCGAAGGAGCATCTGGGTCTTCCCGACCGTGACGACGTCAAGGTGGGTGTCATCACCTACAAGATCGCGGCGCATGCCGCAGACCTCGCCAAGGGTCATCCGGCAGCGCAGCTGCGCGACGATGCGCTTTCCCGCGCCCGCTTCGAATTCCGCTGGGAGGACCAGTTCAATCTGTCGCTCGACCCGGAGACGGCGCGCTCCATGCATGACGAAACACTGCCGAAGGAGGCACACAAGGTCGCGCATTTCTGCTCGATGTGCGGGCCGAAATTCTGCTCGATGCGGATCTCGCATGATATCCGCGCCGAGGCCCAGAAGGAGGGTCTGACCGCCATGGCGGAGAAGTACCGCGCCGGCGGCGATCTCTACATGACGGCAGACGAGATCGCGGCACTTGAGACGGGGGAGCAGTCATGA
PROTEIN sequence
Length: 613
MNIAPNFPKPDVTTGPLPASTKIFLAGDMHPDIRVPLRQIALHPTSGEPPVNVYDSSGPYTDPLATIAIDQGLARRRLDWVRQRGDVEAYDGRDVKPEDNGFVSAEKLTPAFPVKHQPLRATGGKAVTQLAYARAGIITPEMEYVAIRENLGRKAMKEALIRDGESFGAAIPDHVTPEFVRQEIALGRAIIPANINHPELEPMIIGRNFLVKINANIGNSAVTSSMAEEVEKMVWAIRWGADTVMDLSTGRNIHNIRDWILRNSPVPIGTVPLYQALEKVGGIAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVRLHYIPLTVNRVTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICDICRAYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWEKDCQVMIEGPGHVPMHKIKENMDKQLKTCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKVGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWEDQFNLSLDPETARSMHDETLPKEAHKVAHFCSMCGPKFCSMRISHDIRAEAQKEGLTAMAEKYRAGGDLYMTADEIAALETGEQS*