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cn_combo_scaffold_16_20

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(17742..19151)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 469.0
  • Bit_score: 930
  • Evalue 7.70e-268
3-isopropylmalate dehydratase large subunit n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QZZ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 469.0
  • Bit_score: 930
  • Evalue 5.50e-268
isopropylmalate isomerase large subunit similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 469.0
  • Bit_score: 894
  • Evalue 1.60e-257
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGAGCGCACCTCGCACCCTTTACGACAAGATCTGGGACGACCACGTCGTCGATCGTCAGGACGACGGCACCTGTCTTCTCTACATCGACCGTCACCTCGTGCATGAAGTGACGAGCCCGCAGGCCTTCGAAGGTCTGCGCATGGCCGGCCGCAAGGTCCGCGCGCCGCAGAAGACGCTGGCCGTCGTGGACCATAACGTCCCGACCTCGCCGGATCGCCACCTCGGTATCAAGAACGAGGAAAGCCGCATCCAGGTTGAGGCGCTTGCCAACAACGCGGCCGAATTCGGCGTCGAATACTACTCCGCCTCCGACAAGCGTCAGGGCATCGTGCACATCGTCGGTCCGGAACAGGGCTTTACCCTGCCGGGTATGACCATCGTCTGTGGTGACAGCCACACCTCGACGCATGGCGCCTTCGGCGCGCTGGCCCATGGCATCGGCACGTCCGAGGTCGAGCACGTGCTCGCGACTCAGACGCTGATCCAGAAGAAGGCGAAGAACATGCTGGTGCGCGTCGACGGGAAACTCCCGGAAGGCGTGACGGCAAAGGACATCATCCTCGCCATCATCGGCGAGATCGGCACGGCCGGCGGCACCGGCCACGTCATCGAATTCGCCGGCGAAGCCATTGAGGCGCTGTCGATGGAAGGTCGCATGACCGTCTGCAACATGACGATCGAGGGCGGCGCCCGCGCCGGTCTCATCGCCCCCGACGAAAAGACCTTCGAATACATCAAAGACAAGCCGCGTGCGCCGAAGGGCGAAGCGCTCGAGCAGGCGATTGCCTACTGGAAGACGCTGAAGTCCGACGAAGGCGCGCACTTCGATCGCGTCGTCGTACTCGACGCGGCCAACCTGCCGCCGATCGTCTCCTGGGGCTCGTCGCCGGAAGACGTCGTATCGATCGAGGGCGTCGTCCCGAACCCCGACGACATCCAGGACGAGACGAAGCGCACCTCCAAGTGGCGTGCGCTCGACTATATGGGCCTGAAGCCAGGCACCAAGATCACCGACATCGCCATCGACCGCGTCTTCATCGGCTCCTGCACCAACGGTCGTATCGAGGACCTGCGCGAAGTGGCGAAGGTCGTTGAAGGCAAGACGGTGGCATCCACGGTATCGGCCATGATCGTTCCGGGCTCCGGCCTGGTGAAGGAACAGGCCGAAGCCGAAGGTCTCGACAAGATCTTCAAGGCGGCCGGCTTTGACTGGCGCGAGCCGGGCTGCTCCATGTGCCTCGCCATGAACGACGACCGCCTGAAGCCGGGCGAGCGCTGCGCATCGACCTCGAACCGCAACTTCGAAGGCCGCCAGGGCTTCAAGGGCCGCACACACCTCGTTTCGCCGGCCATGGCCGCTGCAGCCGCTGTAGCGGGTCACTTCGTCGACATCCGCAGCTTCAAGTAA
PROTEIN sequence
Length: 470
MSAPRTLYDKIWDDHVVDRQDDGTCLLYIDRHLVHEVTSPQAFEGLRMAGRKVRAPQKTLAVVDHNVPTSPDRHLGIKNEESRIQVEALANNAAEFGVEYYSASDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGKLPEGVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIEALSMEGRMTVCNMTIEGGARAGLIAPDEKTFEYIKDKPRAPKGEALEQAIAYWKTLKSDEGAHFDRVVVLDAANLPPIVSWGSSPEDVVSIEGVVPNPDDIQDETKRTSKWRALDYMGLKPGTKITDIAIDRVFIGSCTNGRIEDLREVAKVVEGKTVASTVSAMIVPGSGLVKEQAEAEGLDKIFKAAGFDWREPGCSMCLAMNDDRLKPGERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAVAGHFVDIRSFK*