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cn_combo_scaffold_16_27

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(24820..25377)

Top 3 Functional Annotations

Value Algorithm Source
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5G9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 185.0
  • Bit_score: 247
  • Evalue 8.50e-63
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EHS52004.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 182.0
  • Bit_score: 246
  • Evalue 2.60e-62
L,D-transpeptidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 185.0
  • Bit_score: 220
  • Evalue 4.10e-55

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGACCAAGAGGCGGAAGGCAGCGAAAATCGCCGGTTCGGCAGTCAAACGACTGTTAATCCGCCCCGCTCCTGGAAATCAAAGGCAGGCTATTCTTCAGGTGGGATCGCTGACCTTCCGAGCGGCCCTCGGACGCGGCGGGCGTACCAGTCGCAAACGTGAGGGCGATGGTGCGACACCGATTGCGGTCATGCCTCTGCTCTCTGCCTATCGCCGGGGTGACCGTGGGCCCTGGCCTTCAACCCTGTTGAGCATGCGGAGATCATCATCCGACATGCTCTGGTGCGACGCGGTCGGCGATCCGAACTACAATCGCCCCGTCCGCGCACCCTTCAGCCCCAGCCATGAGACCTTGCAGCGGAACGACGAACTGTATGATGTCTGCATCGTGCTCGACTGGAATCTGCGAAGCCGCAAGCGCAGATGTGGCTCTGCAATCTTCCTTCACATCGCAAGACCCGGTTACACACCGACAGAGGGCTGCGTCGCCATCAGTCCTCGGGACATGCGGCGCCTGCTCCCGCACCTCGGTCCCAGCACTACGCTTCAGGTTCTTTGA
PROTEIN sequence
Length: 186
VTKRRKAAKIAGSAVKRLLIRPAPGNQRQAILQVGSLTFRAALGRGGRTSRKREGDGATPIAVMPLLSAYRRGDRGPWPSTLLSMRRSSSDMLWCDAVGDPNYNRPVRAPFSPSHETLQRNDELYDVCIVLDWNLRSRKRRCGSAIFLHIARPGYTPTEGCVAISPRDMRRLLPHLGPSTTLQVL*