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cn_combo_scaffold_36_42

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(46442..47437)

Top 3 Functional Annotations

Value Algorithm Source
FecR protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6YYD9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 335.0
  • Bit_score: 208
  • Evalue 7.80e-51
FecR protein {ECO:0000313|EMBL:EEA93413.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 335.0
  • Bit_score: 208
  • Evalue 1.10e-50
putative FecR similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 329.0
  • Bit_score: 207
  • Evalue 6.40e-51

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Taxonomy

Pseudovibrio sp. JE062 → Pseudovibrio → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGCACGCAGTGACTGACAATGAGGACCAGGCGCGCTATCGGCATCCGGACCCGATCATAGACCAGGCACTCGAATGGGTGTTGAAGCGTCAGGCGGGGGAGGTCGACCAGGATGCGCTCGATGCCTGGCTGGCCGAAGGTGCGGACAGGGGCGCGGCTTTGGCGCGGGTGCTGGCGCTCTATGAATGTCCCGCATTGACCGTGGCTTCCGCCCAGACGGCGACGGCATCGCTGCTGCCGGTCGAGGCCATCAGACACTCGCCGGCTATCACCCGGCGCTCTCCGCATCTGTCGCTCGCGCTCGCGGCCTCGATCACCGCCGCCATCGTCGTGCCGCTGATTGGAAGCGACTGGCTGCTCGGCTTGCAGGCCGACTATCGTACCGCTGCCGGCGAGATCGTCGCGGTCGATCTGCCCGACGGCTCCCGCATGCAGATGAACAGCCAGACGGCAGTGCGCCTCGATTTCGAAAATGGCAGGCGGGCCGTGCGGCTTCTCGAGGGTGAGGCCTATTTCGAGGTGGCGCATGACGCTGCCCGGCCGTTCAGTGTGACAGGGGCCTATGGCACTGTGACGGTGACCGGTACGGCCTTCGACGTGGCGCGCGGTGATGCAGAAGACGTCGTGCATCTGGCAAGCGGTCGCGTTGTCTTGACCCGCGATGGCGAGCAATCGAGCCCGGTTGCCATGACGCCAGGCCAGACGGCGGCCGTCGATCGCACACGGATCACATTCCTTCCTCAGGGAGACGATGAAAGCCGGCTTGCCTGGCGCGAAGGCTGGATCCAGCTTTCCGCCATTCCCTTGCGGGACGCCCTCGTCGAGATCGGACGCCATACGGATCTCACCATTATCTCCCTGCCGGCCGCCGCCCTTGAAACCCCCGTCAGCGGCAGCTTCCGCATCTCCGAGGCGGATGCCGCACTCGACAGCGTCGCAACCGCCGCAGGGGCACGCATCGAGCGATTGCCGGGCGGCATCTTATTCATTCGCTAA
PROTEIN sequence
Length: 332
MHAVTDNEDQARYRHPDPIIDQALEWVLKRQAGEVDQDALDAWLAEGADRGAALARVLALYECPALTVASAQTATASLLPVEAIRHSPAITRRSPHLSLALAASITAAIVVPLIGSDWLLGLQADYRTAAGEIVAVDLPDGSRMQMNSQTAVRLDFENGRRAVRLLEGEAYFEVAHDAARPFSVTGAYGTVTVTGTAFDVARGDAEDVVHLASGRVVLTRDGEQSSPVAMTPGQTAAVDRTRITFLPQGDDESRLAWREGWIQLSAIPLRDALVEIGRHTDLTIISLPAAALETPVSGSFRISEADAALDSVATAAGARIERLPGGILFIR*