ggKbase home page

cn_combo_scaffold_36_69

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 77329..78210

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QDF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 293.0
  • Bit_score: 586
  • Evalue 1.20e-164
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKF59041.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 293.0
  • Bit_score: 586
  • Evalue 1.70e-164
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 288.0
  • Bit_score: 351
  • Evalue 1.90e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCAGTCCGAAATCGAAGGCATTCGCGCCCTCATGCCGCCCAGATGGCGTTCCCTTGACGGCGTCGTTGGCGTCCATTGGGAAGCAGAAGGCCATGCAGGGGCGAACGGCTATTATCTGTCGCCGGATCCCCGGATCGTCTTCTTCTTCAACGATGTCAGCAGCCAGATCCGGGTGGCGGACCGGGCGGAGGAACTGGACCGAGGCGAGCGGGGCATGGCACGCGCCATCTATGTGCCGGCCGGCATGCCCATGTGGACGAAGTTCAGCAGCCGCCATCGCTTTTCCCACCTCGACCTGCATCTGCACACGGAACGGCTGATGCGCTATCTCACGCCGGCTGTCGGCTCGTCGGCGGCGCGCGCCATCATCAAGCAGCCGGTCGAACTGCAGGATCCCGGCCCCCTGGCCAGCCTTGCGACGCTTGTTGTCGACGAGTTGTCGACGGATGGCAGGCATCCCGCCTTTGCCGAGAATCTGGTGGGCAGCATCGTCACCGGACTTCTCGATCTGCGGATCAGCGACGATCGAACGGCGGCGCATGCCGGGCATCTCACCAAGGCGCAACTGAACCGGCTTTCGGGATATTTCGCCAATTGCGGCGGGCGTCGTTTGAGCGTCCGAGAAATGGCCGATGTCGTCGGCCTCTCCGAGAGCTGGTTCGCCACGGTGTTCCGTCAGACCACGGAGATGACACCGCTGCAATGGCAATTGTCACGCCGGATCGACATGGCGCGGCAGATGCTTTCGGAAACCGAGATGAGCATCGCTGACATCAGCGCGCAACTCGGCTTTTCCGACCAGGCGCATCTGACCAAGGTGTTCCGCAGCATCACCGGGGACACCCCGGCCGTCTGGCGACGCAAACACCATTCCATCTAG
PROTEIN sequence
Length: 294
MQSEIEGIRALMPPRWRSLDGVVGVHWEAEGHAGANGYYLSPDPRIVFFFNDVSSQIRVADRAEELDRGERGMARAIYVPAGMPMWTKFSSRHRFSHLDLHLHTERLMRYLTPAVGSSAARAIIKQPVELQDPGPLASLATLVVDELSTDGRHPAFAENLVGSIVTGLLDLRISDDRTAAHAGHLTKAQLNRLSGYFANCGGRRLSVREMADVVGLSESWFATVFRQTTEMTPLQWQLSRRIDMARQMLSETEMSIADISAQLGFSDQAHLTKVFRSITGDTPAVWRRKHHSI*