ggKbase home page

cn_combo_scaffold_36_152

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(170842..171399)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic subunit n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PDH1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 185.0
  • Bit_score: 377
  • Evalue 7.10e-102
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:EKF58958.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 185.0
  • Bit_score: 377
  • Evalue 9.90e-102
lytic transglycosylase-like protein similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 182.0
  • Bit_score: 279
  • Evalue 7.40e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGTTCCCGCTTCCGGCAATCGCGGCGCTCGCCCTGATCAGCTTTACGTCTGAGGCAGAGGCAAGTCGCGGCGCCTGTGAGGGCGCCATCGGCGCGGCCGCAGCCAAATACGGCGTTCCCGAAGGCATCCTCTATTCGGTCGGCCTGACAGAGACTGGCCGCAAAGGGAGCCTTGCGCCCTATGCCATGAACGTCGAGGGCAAAGCCTATTATTTCGACGATCTGGATGCGGCTCTCGATGCTTTCGAGCGGGCAAGAATGGGTGGTGCGAAGCTGATCGACGTCGGATGCATGCAGATCAATCAGCACTTCCACGGAGAGCACTTTACCTCAGTCGAGGCGATGTTCGACCCGAAGCGCAACGTGGAGTATGCCGCACGCTTCCTGAGCAACCTGCACAATCGTCACGAAACCTGGACTATGGCGGTCGCCCGCTATCACGCGGGCCCCAACAATGATCCCGCCCAGAAGCGTTACGTGTGCCGTGTGATCTCCAATCTGGTCGCAACGGGATACGGAAACTGGACGCCTAATGCGCGACAATTTTGCGGTGAATAA
PROTEIN sequence
Length: 186
MFPLPAIAALALISFTSEAEASRGACEGAIGAAAAKYGVPEGILYSVGLTETGRKGSLAPYAMNVEGKAYYFDDLDAALDAFERARMGGAKLIDVGCMQINQHFHGEHFTSVEAMFDPKRNVEYAARFLSNLHNRHETWTMAVARYHAGPNNDPAQKRYVCRVISNLVATGYGNWTPNARQFCGE*