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cn_combo_scaffold_55_5

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 2520..3575

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q8W5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 351.0
  • Bit_score: 284
  • Evalue 2.00e-73
Site-specific recombinase XerD {ECO:0000313|EMBL:EIG56221.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 351.0
  • Bit_score: 284
  • Evalue 2.80e-73
Integrase similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 349.0
  • Bit_score: 281
  • Evalue 2.80e-73

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Taxonomy

Bradyrhizobium sp. WSM1253 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGATCCGGCACAAGCTCCCTAAATACGTTCAGATGCATAAGGACCCTCGCGACGATAAGAAGTGGCGCATCTACTACCGTCGTGCGGGTAAGCCCAAGATCGCTTTACGAGGGCCGATCTATTCCGAAGATTTCTGGATCGACTATCGGAAGGCAGAGGCGGGCGAGGTGGCCCAGACCGGAGTAGGGGCTTCCAAGACCATCCCCGGCACCATCAACTCCCTGATCGTCAAATACTATGCGTCAGCGGACTTCCTTGACCTCGCGCCAGCGACCCAACGGAACTACAAGTCCGTGCTGGAGCCGTTCCGCACCGAGCATGGCGACAAGCCCTTGGCTGGTCTACGCCGTGAGCACATCAACGCCATCCTGAACAAGCGGGCGCTCAGCTCGACTGCGCAGGCTAAGAACCTGAGCAAACGTCTATCGACACTGTTCAAGTTCGGCTTGGATTTCGGCCTGATCAAGGAAAATCCGATGATCGGCGTCAAACGGGTCAAGCATCAAGAGACGCATTACGAGATGTGGACCGATGACGACATCTCCCGATATCGGGCACATTGGAAAGAAGATACGCCGCAACGCGTCGCTCTCGAAATCCTGATCTACACTGGCTTGCGTCGGAGTGATGCGGTGCTGCTAGGCCCGGGGCACGTGAAAGATGGCTGGATCACCATCACCGCGCAGAAAACCGGCGTGGAACTTGATATTCCTATCCATCCAAAGCTTCGCCCGTTCCTCTCCATCCGCAACGATGGAAAGCTGGTAAACCTGACCACGTTCATCTCGACAGTACACGGGAAGCCTCGATCTGAAAAAGCCTTCACCAACTGGATAAAGGAAGCAGCCACAGAAGCGGGGTTGCCTCCCAGCCGGTCACCTCATGGGCTACGCCGCGCAGCGTGTAGGGCGCTCGCAGAAGCCGGGTGCACGTTCTCGGAAATCATGTCCATCACCGGACACCAAAGCACCAAGGAGGTGGAGGCTTACGTGGCCGATGTGGACAAGAAGAAGCTGGCCAAAAGCGCCATGGCCAAGTGGGAGGCGACGTCTTGA
PROTEIN sequence
Length: 352
MIRHKLPKYVQMHKDPRDDKKWRIYYRRAGKPKIALRGPIYSEDFWIDYRKAEAGEVAQTGVGASKTIPGTINSLIVKYYASADFLDLAPATQRNYKSVLEPFRTEHGDKPLAGLRREHINAILNKRALSSTAQAKNLSKRLSTLFKFGLDFGLIKENPMIGVKRVKHQETHYEMWTDDDISRYRAHWKEDTPQRVALEILIYTGLRRSDAVLLGPGHVKDGWITITAQKTGVELDIPIHPKLRPFLSIRNDGKLVNLTTFISTVHGKPRSEKAFTNWIKEAATEAGLPPSRSPHGLRRAACRALAEAGCTFSEIMSITGHQSTKEVEAYVADVDKKKLAKSAMAKWEATS*