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cn_combo_scaffold_72_6

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 6063..7367

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane transporter protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JTE5_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 386.0
  • Bit_score: 178
  • Evalue 1.10e-41
Integral membrane transporter protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 386.0
  • Bit_score: 178
  • Evalue 3.20e-42
Integral membrane transporter protein {ECO:0000313|EMBL:ACM35858.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 386.0
  • Bit_score: 178
  • Evalue 1.60e-41

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGCCTGTTGTTCTCTATTCAGTTTCGATGGAGGCCGCCGTGCCACAGACCCCGGAGTACCTACAAGCTTTCCCGATGATCCTGCCTGCGATCGCGCTTTGCTGGGGCCTATGCCGGATGTTTCTCAAGTGCCCGAAGTCGGCATTGTTACCGGATTTCTTGCTCTACATATGTGCCGGGTTCCTGGTGAAAACGGTCTGCGGTACCTTTTTCCCGGACAGCATGGCGCTGTTGACAAAACAAAATGATAGCTTTGTTGCGATCCAATTCGTCGCTCTGTTTTTCTTTATGACGCCGAGCTGTGCAAATCTGCGTTTCGAGGGCCTTAGCAGTCACGCGAAGGAGGTCGGCAGTCTGGTGACAGGCTGCGTTCTGGCATTCTTGCTCGCCCTGCTATCGGCACCCGCCATAGCCAGGTTGGCGCCTGATCCTTTGTTCGTCGATGCCGACGAAAACATCCGATTTGCGCATTTCCTGGTCTTGAGCCTCGGCGCGATGGTGACCTCCATTCCGTTCCTGACCAAGATCCTGCTGAGTAACGGTTTGCTCAAGTCCCGCTTCGGCAAAAGCCTTTTGCTTTCGGCCTGTATTGTCGACATTGTGGTCTGGATCATCTTCTCGATTGCCCTTTCGATTTTTTCGAGTGGCGGGGCGGATATCAGCACGGCCGGCTGGCAAATCCTGCGAGCGATCGCCCTCATAGGGCTGACACTCGGTCTCGGCATTCCGCTCGTCCGATGGGGTGCGGCGGCGCTTCAGCGCAACAGCTGGCTCCATTTTCTCTTCGCGCTCGCGGTCGCGAGCGGCACCCTTGCCTTTACCATGCTGGTTGGCCTCGAGCCGATCGTCGGAATGGTTCTCGCTGGGCTTGTCGCCGGTTCCGCTCGCGAGCATATCGCGGAGGGACTCGACCGCATGGAAAAACTAGCCGCCACTTTCGGCGCCCGGGTCTATTTCATCTGCGTCGGTTTCAGCATCAACCTGACCTCAACGCCCAATGTCGCGATGATCGTCGTCTTCCTGCTTTGGACCTCAGCGGTCAAGATCGGGTCGGTTGCCGTCACGACAGGTTTCCTGCGCCAGCCAAGCTGGTCCAGTTTGGGCTTCGGCATCGCCATGAATACCCGGGGCGGACCGGGGCTGGTCCTTGCGGCCGCATCCTATTCCGCCGGGCTTGTCAGCATCACGGGTTTCATGGCCCTGACGCTGACCTCGATTCTCACCGCTGTGATGACGGATCTGTATCTCCGGTCGGAGCTGCGGAACGGTCGAGTGCCACTGCACAACCAAGGGAACAAACTCTGA
PROTEIN sequence
Length: 435
MPVVLYSVSMEAAVPQTPEYLQAFPMILPAIALCWGLCRMFLKCPKSALLPDFLLYICAGFLVKTVCGTFFPDSMALLTKQNDSFVAIQFVALFFFMTPSCANLRFEGLSSHAKEVGSLVTGCVLAFLLALLSAPAIARLAPDPLFVDADENIRFAHFLVLSLGAMVTSIPFLTKILLSNGLLKSRFGKSLLLSACIVDIVVWIIFSIALSIFSSGGADISTAGWQILRAIALIGLTLGLGIPLVRWGAAALQRNSWLHFLFALAVASGTLAFTMLVGLEPIVGMVLAGLVAGSAREHIAEGLDRMEKLAATFGARVYFICVGFSINLTSTPNVAMIVVFLLWTSAVKIGSVAVTTGFLRQPSWSSLGFGIAMNTRGGPGLVLAAASYSAGLVSITGFMALTLTSILTAVMTDLYLRSELRNGRVPLHNQGNKL*