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cn_combo_scaffold_72_66

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(71949..72965)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QIP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 338.0
  • Bit_score: 677
  • Evalue 7.90e-192
Putative transcriptional regulator {ECO:0000313|EMBL:EKF61001.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agroba similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 338.0
  • Bit_score: 677
  • Evalue 1.10e-191
putative transcriptional regulator protein, LacI family similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 338.0
  • Bit_score: 502
  • Evalue 7.50e-140
  • rbh

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGACAGGCATTCGCGAACTGGCCGAACATCTCGACATCTCGATCGGGACGGTGTCGCGTGCGCTGAACGGCAAGCCCGACGTCAACGAAGAGACACGCCGACGCGTGCTGGAAGCCGCCGAGAAGCTGGGTTACGTGGCCAACCAGGCCGGCCGCTCGCTACGCAAGGGCGCAACCGGCATCATCGGCTTCATGATGCAGACCGGCCATGACATTACCGGCCAGGGGGATACCTTCTTCATGCGCGTCTTCGACGGCATGCAGACGGTGCTTGCCCGCCACAAGCTCGACCTCGTCGCCCTGCTCTGCTCATCGGAGGAAGATCCGGACGCTTACCTGAAGCGCATCGTCGCGCGCGGCTTCGCCGACGGCATCATCCTGTCGGCCACTCGCTACCAGGATCCGCGCTTCGAACTCCTGCACAAAACGAAGATCCCCTTCATCACGCTTGGCCGAAGCCAGACGGATGTCGGCCAGCCCTGGTACGATCTGGATTTCGAAGGCATGGCGGAAGACGCGATCGAACGTCTGGTGGCGCGCGGCCACACGCGAATTGCCATCAGCCGCCCGCATGGCGACATCAACCTCGGCCATGTCTTCGAGAACCACTGCCGCGTCGTGCTCGCCCGCCACGGCCTGGAGCTTGACCCGGCGCACGTCTATCGCTCAGGCCCGAACGAGCCGGGCGGCTATCACGTCGCCCAGCAGGTGATGAAATCACGCGACCGTCCCACAGCGATCATCCTCCTCAACGAGGCGACCGTGGTAGGCTTCTATCGCGGCCTGCAGGAGGTAGGATTGAAGCCCGGCAAGGATATCGCGGTCATCGGGCAATACAGCCCGCAGGCGCAGTTCCTGAACCCGGTTCTGACCTGCTTTCGGCCGGACTTGAGGGCGCTCGGCATCGCGCTCGCCGAAAGCCTGCTCGCCACCATGCCGGACTTTGCACATCACTATCCGGATGCCGTTCGCAGGCGCCTGTGGCCGATGATCCTGATCGAGGGTGAGAGCGACTGA
PROTEIN sequence
Length: 339
MTGIRELAEHLDISIGTVSRALNGKPDVNEETRRRVLEAAEKLGYVANQAGRSLRKGATGIIGFMMQTGHDITGQGDTFFMRVFDGMQTVLARHKLDLVALLCSSEEDPDAYLKRIVARGFADGIILSATRYQDPRFELLHKTKIPFITLGRSQTDVGQPWYDLDFEGMAEDAIERLVARGHTRIAISRPHGDINLGHVFENHCRVVLARHGLELDPAHVYRSGPNEPGGYHVAQQVMKSRDRPTAIILLNEATVVGFYRGLQEVGLKPGKDIAVIGQYSPQAQFLNPVLTCFRPDLRALGIALAESLLATMPDFAHHYPDAVRRRLWPMILIEGESD*