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cn_combo_scaffold_111_29

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(28143..29171)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 342.0
  • Bit_score: 688
  • Evalue 3.70e-195
Pseudouridine synthase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QXW9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 342.0
  • Bit_score: 688
  • Evalue 2.70e-195
rluD; ribosomal large subunit pseudouridine synthase RluD subfamily similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 340.0
  • Bit_score: 569
  • Evalue 8.70e-160

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGACCGACCCCTTTAACGAAGCCGCCGCATCAAGGAAAGAGCTGATTGCCGAAGACGATGCCTCGGGCCGCATCGACGCCTGGCTGACGGCGGCGCTCGGTCAGGAGTTTTCCCGCAACCGGGTGAAGGCGCTGATCGAACAGGGGGCGGTGCAGCTCAACGGCAATCTGCTCGACAGTCCAAACCGCAAGATCAAGCCGGGCGACAGCGTCGTCATCGACCTGCCCGAGCCGGAAGATCCACAGCCAAAGGGCGAGAACATCCCGCTCGAGGTCCTCTACGAGGATAAAGACCTGATCGTGATTGCCAAGCCGCCGGGTCTCGTCGTCCATCCTGGCGCCGGCAACTGGCATGGCACATTGGTCAATGCGCTGATCTATCACTGCGGCGACACGCTCTCGGGCATCGGCGGCGTCAAGCGCCCCGGCATCGTGCACCGCCTCGACAAGGACACGTCGGGCGTGATGGTCGTCGCCAAGAACGATATTGCCCATCGTCACCTTGCCGACCAGTTCGCCGATCACGGCCGCACCGGCCCGCTGGAACGCGCCTACCGTGCCGTCGTCTGGGGCCGCCCTCGTACGCTTGCCGGTACGATCGATGCGGCGCTGGGCCGCTCTGGCGCCGATCGCACCAAGCGCACGGTGAAGCGTGAGGACACCGACGACGCCCGCGAGGCGATCACCCACTATACCGTGCTCGAACGCTACGGTGAAAAGCCTGATGCCACCTGCCTTGCCTCACTGGTCGAGTGCCGCCTGGAGACCGGCCGCACCCATCAGATCCGCGTCCACATGGCCCATATCGGCAATCCGCTCGTCGGCGACCAGGAATACGGCGCCGCCTTCAAGACCAAGGCGAACCTCCTGCCCGAGGACGCCAAGCGCGCCGTCAACAAATTCCACCGCCAGGCGCTGCATGCCTACCTGCTCGCCTTCGAACACCCGACCACAGGCGAAACCATGCGTTTCGAAGCGCCGATCCCGGCGGACCTGCAGAAGGTGATCGATGCGCTCAAGGCGATGTGA
PROTEIN sequence
Length: 343
MTDPFNEAAASRKELIAEDDASGRIDAWLTAALGQEFSRNRVKALIEQGAVQLNGNLLDSPNRKIKPGDSVVIDLPEPEDPQPKGENIPLEVLYEDKDLIVIAKPPGLVVHPGAGNWHGTLVNALIYHCGDTLSGIGGVKRPGIVHRLDKDTSGVMVVAKNDIAHRHLADQFADHGRTGPLERAYRAVVWGRPRTLAGTIDAALGRSGADRTKRTVKREDTDDAREAITHYTVLERYGEKPDATCLASLVECRLETGRTHQIRVHMAHIGNPLVGDQEYGAAFKTKANLLPEDAKRAVNKFHRQALHAYLLAFEHPTTGETMRFEAPIPADLQKVIDALKAM*