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cn_combo_scaffold_133_24

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 27926..29620

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PXI1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 564.0
  • Bit_score: 1011
  • Evalue 3.80e-292
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EKF57435.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; A similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 564.0
  • Bit_score: 1011
  • Evalue 5.40e-292
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 551.0
  • Bit_score: 510
  • Evalue 7.90e-142

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1695
ATGTATCTGCGCGATGATCGCACCAGTCACGGAGGCAAAGAGCCCGGCGCCGCAGGTGCGGAGCGCCTATCCGGACACTCCGCAGACACCCGTGTCGGGCGACCTTCCCTGCGGGACATGCTGGAACGCCACGACGACTACCTCGATTTTCTGCGCGCCCGCGTCTCCATGCTTGAGGGCCAGGTCAACAGCATGGAGGTCGGGGAATCCAGACCTTCCGCTCCGTCTGCTGTCCCGAAACAGCAGCCCTCGCCCGAAATCTCCACGGACAATCGTCAGGATGAAAACCGCGACGGCACCGCCGTTCCGCGGGATCAGACGGAATGGAAGCCTCTGATCGATCCATTCATCGTCGTCGACATTCTCAAGCGGTCCCATCGCATCCTGATTGCCTCGACGGTGATCGGTGGCCTCTTTGGGTCCGCCTATGCACTGACCCTACCGAAAATGTGGGTGGCAAGCAGTGACATCCTCGTAGACCCCCGACAGATCCGAACCGTCGGCGACCAGTTGACCACCGACCAACTGCCGACAGATGCGTCGCTCGCCGTGGTCGAAAGCCAGGCGCGCATCGTCAAGTCGAACAGTGTCTTGCTGAAAGTCATCGAGCAGGCCGACCTCAAGCAGGACCCGGAATTCAACGGCACCCTGAAGCCCTCCGGCCTGAGCGCCTTCTGGTCGAGTGGATCCCAGAGTGACGCTCAGAACATCGAGTCACGCGTTCTGAACCACCTTCACGAAGTCATCGACGTGAGCCGGGATCAGAAGACATTCATCTTTTCAATCTCCGCAGAAACGCGGGATCCGGAGAAGTCCGCGCGTCTGGCCAACATCGTCAGCGGCGTCTTTCAGCGCGAACTGGCCTCGATGCAATCCGACGCTGTCCGCCGTACATCGGACGAACTGTCGAGCCGCCTTACCGACCTGCGCATGAAGCTCGAAGAGGCGGAAAAGGCCGCCGAAAGCTTCCGCAACTCGAATGACCTCGTGAATGTCGATGGCAGACCGATCGTGGACAACGATCTGAAACTGCTGAATGAAAGACTGAGTTCGCTGCGCGTCGAAACTGCGGGCCTGCGCGCCAAGATTACCAGTATCGCAAAGATGGCGGCCTCCAGCGGCGGTGAACTGGCGCTCCCCGAAGACGTGAGTTCCGACACGATCGCAGTCCTGCGCACGCGTTATGCCGATCTGCGCAAGGAACTCGAATCGATCGCGGCCCGCTATGGACCGCAACACCCGAGATATATCGAAGCACAATCGCAGGCCAGCGGGATGCTCAACCAGATCCGCGAAGAACTCGGCCGCATCCGCAGCGCCCTGCAGGTAGAGCTGGATCGCTCCCTCCAACAGGAAGTGGCACTTACCAGCCGCCTACGGGAACTCAAGGACACTCAGGCGTCGAACAATGACAGCCTCGTCACCTTGCGCGAACTCGAGCGCGAGGCGGCGGCACGCCGTTCGGTCTACGAATCCTTCCTGCTCAGAACCCGCGAAACCGGGGAACAGGAAGCCATTACACTCGCCAATATTCAGGTCCTGTCGGAGGCGCGCCCACCGCTTGATCCGGTCGGCCCCTCTCGCAAGGTCATTGCACTCGGCGGCCTGATCGCTGGATTTGGCTTCGGCGTTCTGCTCGCCCTTGGCCTCAATCTGACTCATTTGAGGAAACGCCGCGAAGGCGCACAGGCCTGA
PROTEIN sequence
Length: 565
MYLRDDRTSHGGKEPGAAGAERLSGHSADTRVGRPSLRDMLERHDDYLDFLRARVSMLEGQVNSMEVGESRPSAPSAVPKQQPSPEISTDNRQDENRDGTAVPRDQTEWKPLIDPFIVVDILKRSHRILIASTVIGGLFGSAYALTLPKMWVASSDILVDPRQIRTVGDQLTTDQLPTDASLAVVESQARIVKSNSVLLKVIEQADLKQDPEFNGTLKPSGLSAFWSSGSQSDAQNIESRVLNHLHEVIDVSRDQKTFIFSISAETRDPEKSARLANIVSGVFQRELASMQSDAVRRTSDELSSRLTDLRMKLEEAEKAAESFRNSNDLVNVDGRPIVDNDLKLLNERLSSLRVETAGLRAKITSIAKMAASSGGELALPEDVSSDTIAVLRTRYADLRKELESIAARYGPQHPRYIEAQSQASGMLNQIREELGRIRSALQVELDRSLQQEVALTSRLRELKDTQASNNDSLVTLRELEREAAARRSVYESFLLRTRETGEQEAITLANIQVLSEARPPLDPVGPSRKVIALGGLIAGFGFGVLLALGLNLTHLRKRREGAQA*