ggKbase home page

cn_combo_scaffold_133_31

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(38017..38910)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QR40_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 296.0
  • Bit_score: 569
  • Evalue 2.00e-159
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF57442.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 296.0
  • Bit_score: 569
  • Evalue 2.90e-159
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 295.0
  • Bit_score: 482
  • Evalue 1.20e-133
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCTGCCTGCCCGACGTTTCCTTCCATCGCTTTCGTTGCTCACGGCATTCGAGGCCGCGGCCCGGACGGGAAGCATCACGGCTGCGGCACGGGAGCTCGATCTGACGCAAAGCGCGGTCAGCCGACAGATCAAGGCATTGGAGAGCCAGCTCGGTGTCGAACTGTTTCTGCGCGAGCGTCAGACGATCCGACTGACCGTCGCCGGCGACAGCTATGCCCGTGAGATCCGGGAAGCGCTTCGCCGCATCTCCAGCGCGTCCTTGAACCTGCGCGCCAATCCGCATGGCGGTACGCTCAATCTTGCAATCCTACCGACATTCGGTGCCCGTTGGCTCGCCCCGCGCCTCGGTCAGTTTCTGGCCGCCAATCCCGGGATCACGATCAATCTGGTGACGCGACTGTCGCCATTCGACTTCCGACTGGATTCGATCGATGCGGCGATCCATTTCGGCGATGCGGTTTGGCCGGGCGCGGAACTGACACTCTTGATGCGGGAGGAGACGATCCCTGCATGCAGCCGGGACTTCAAGCAAGCGCATGGGATCCAAGCGCCATCCGATCTTCTGCGCGTGCCTCTGCTGCATCTCACGACCCGACCGGATGCCTGGGAACGCTGGTTCACGGAAACCGGTGTGGCCTTTGAGAATGTGCATGGCATGCTCTTCGACCAGTTCGCCACCGCGTCGCAGGCGGCGATCGGCGGCCTCGGCGTGGCGCTGCTTCCGACCTTCCTCATCCAGGAGGAACTCGCGCGCGGCGAGCTGACGGCTGCTGTCGATCGCCCGATGCAGAGCGCGCAACGATACTATCTCGTCTTTCCGCGGGAGAGGGCGGCCTATCCGCCGCTGGTTGCCTTCCGGGATTGGATCGTCAAGGAGCTTGCCCAGCGCTAG
PROTEIN sequence
Length: 298
MLPARRFLPSLSLLTAFEAAARTGSITAAARELDLTQSAVSRQIKALESQLGVELFLRERQTIRLTVAGDSYAREIREALRRISSASLNLRANPHGGTLNLAILPTFGARWLAPRLGQFLAANPGITINLVTRLSPFDFRLDSIDAAIHFGDAVWPGAELTLLMREETIPACSRDFKQAHGIQAPSDLLRVPLLHLTTRPDAWERWFTETGVAFENVHGMLFDQFATASQAAIGGLGVALLPTFLIQEELARGELTAAVDRPMQSAQRYYLVFPRERAAYPPLVAFRDWIVKELAQR*