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cn_combo_scaffold_145_24

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(22274..22879)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QX88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 201.0
  • Bit_score: 388
  • Evalue 4.40e-105
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1156935 s similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 201.0
  • Bit_score: 388
  • Evalue 6.10e-105
rplY; 50S ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 202.0
  • Bit_score: 329
  • Evalue 5.20e-88

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGCCACGCTTCTTACGAGCTCAAGGCCGTAGCACGCGAACGGGTAGGTAAGGGGTCCTCCCGCGAACTTCGCCGCAACGGTCTCATCCCGGCTGTCATCTATGGTGACAAGCAGGCCCCGATTGCGATCTCGATCAATACGAACGAGATCACCAAGCGCATCCATGCCGGCGGTTTCATGACCACGATCGCCACCATCGATCTCGATGGCAAGAAGATCAGCGTTCTGCCGAAGGACTACCAGCTCGACCGCGTTCGTGACTTCACGATGCATGTCGACTTCCTGCGCGTCTCGGCAAACAGCCAGGTCTCGGTTCAGGTTCCGGTTCACTTCGTCAACGAAGAGAAGTCGGCCATCAAGACCGGCGCCGTTCTCAACATCGTTCGTCACGAAGTTGAACTGCACTGCCCGGCTTCCGACATTCCGGAAGCGATCACGGTTGACCTCGCCGGCCTGAAGGTTGGCGACGCGATCCACATCTCGGCCGTCAAGCTGCCGAAGGGCGTGACCCCGGTCATCGCAGACCGCGACTTCACGATCGCAACGATCGTCGCTCCGGCAGCCGGCGTTGCCGAAGAAGAAGAAGGTTCGGCGGAAGCCTGA
PROTEIN sequence
Length: 202
MSHASYELKAVARERVGKGSSRELRRNGLIPAVIYGDKQAPIAISINTNEITKRIHAGGFMTTIATIDLDGKKISVLPKDYQLDRVRDFTMHVDFLRVSANSQVSVQVPVHFVNEEKSAIKTGAVLNIVRHEVELHCPASDIPEAITVDLAGLKVGDAIHISAVKLPKGVTPVIADRDFTIATIVAPAAGVAEEEEGSAEA*