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cn_combo_scaffold_145_48

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(42688..42903)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QFY2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 146
  • Evalue 1.00e-32
Cold shock protein {ECO:0000313|EMBL:EKF60006.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 146
  • Evalue 1.40e-32
cspA; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 1.90e-32

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCGAGACTGGCACTGTAAAGTTTTTTAATACCGACAAGGGCTTTGGCTTCATCAAGCCCGACAATGGCGGCGCGGACATCTTCGTCCACATCTCCGCCGTTCAGGCATCGGGCCTGTCGGGCCTGACCGAAAACCAGAAGGTCAGCTTCGACACCGAACCCGATCGCCGTGGCAAGGGCCCTAAGGCCGTAAACCTGCAGATCTCCGGCTGA
PROTEIN sequence
Length: 72
MAETGTVKFFNTDKGFGFIKPDNGGADIFVHISAVQASGLSGLTENQKVSFDTEPDRRGKGPKAVNLQISG*