ggKbase home page

cn_combo_scaffold_923_27

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 29309..30046

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 240.0
  • Bit_score: 457
  • Evalue 7.10e-126
Zn-dependent hydrolase {ECO:0000313|EMBL:EYR79363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 240.0
  • Bit_score: 457
  • Evalue 1.00e-125
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 242.0
  • Bit_score: 429
  • Evalue 7.70e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAAACCGCGCATGCGCCCTGAGGACTGGTACAGTGTCCGGCGTCTCGACGATGACGTGACCTATATCTGCGAGCCGCATATCCAGGAATTTTACCGCTGCAACATCTGGCATGTGCGTGGGCGCGATCGCGACATGCTTGTTGACAGTGGCATGGGCGTCGTCTCGCTTCGTGAATGGGTCCCGCTTGTCACCGAGCGTGAGCTGATCGCGGTGGCAAGCCACACCCATTTCGATCACATCGGCTGCCACCACGAGTTCGAATGCCGTGCGGTCCATTCGGCAGAGGCGGATCTGCTCGCTGATCCGACACGCGAAAACACGCTGGCCGACCCCTATGTTACCGACGACATTTTCGACGCCCTGCCGCCCGAGCCCTATTGCTCGAAGTGTTATGCGGTGAAGCGGGCGCCGGCGACGCGCCTGCTGGAGGACGGCGACATGGTCGACCTCGGCGATCGGCAATTCGAGGTCATTCACACTCCCGGCCATTCCCCCGGGGGCATCGCGCTCTACGAGAAAGCGACGGAAATCCTGTTTTCCGGCGACATTCTCTACGACGGTCCGCTGATCGAGGACACCTACCACTCGAACGCCAATGACTATCACGCTTCGATGGAGCGCCTGCTGCGGCTGAAGGTGCGGCTGGTGCATGGCGGCCATTTTCCAAGCTTCAGCGGCGAACGATATCGGGAGCTGATCACCGGTTGGCTCGACGCAAAACACAAGACACTCTGA
PROTEIN sequence
Length: 246
MKPRMRPEDWYSVRRLDDDVTYICEPHIQEFYRCNIWHVRGRDRDMLVDSGMGVVSLREWVPLVTERELIAVASHTHFDHIGCHHEFECRAVHSAEADLLADPTRENTLADPYVTDDIFDALPPEPYCSKCYAVKRAPATRLLEDGDMVDLGDRQFEVIHTPGHSPGGIALYEKATEILFSGDILYDGPLIEDTYHSNANDYHASMERLLRLKVRLVHGGHFPSFSGERYRELITGWLDAKHKTL*