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cn_combo_scaffold_2790_18

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(18304..18507)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein cspA n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QPW1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 134
  • Evalue 2.90e-29
Cold shock protein cspA {ECO:0000313|EMBL:EKF57022.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 134
  • Evalue 4.10e-29
cspA; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 7.70e-28

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCACTGGTACCGTCAAATTCTTCGCCCAGGACAAGGGCTTCGGCTTCATCACCCCCGACAATGGTGGACCGGACGTATTCGTTCACATCTCGGCTGTGGGTGGCGGCTCTCTTTCTGATGGCCAGAAGGTCAGCTACGATGTCGGCCAGGATCGCAAGACCGGCAAGTCCAAGGCGGAAAACGTAACCGTCGTCCGCTAA
PROTEIN sequence
Length: 68
MATGTVKFFAQDKGFGFITPDNGGPDVFVHISAVGGGSLSDGQKVSYDVGQDRKTGKSKAENVTVVR*