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cn_combo_scaffold_8839_1

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3..716)

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3Y0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 238.0
  • Bit_score: 430
  • Evalue 9.00e-118
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR79286.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 238.0
  • Bit_score: 429
  • Evalue 3.70e-117
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 238.0
  • Bit_score: 214
  • Evalue 3.80e-53

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGAGGCCTGCGGATCGCCACGAGAGAATTGTCAGGCTTGTGCACAAGGCGGGGGAAATCAGCGTCGATGAACTGGCCCAGACGCTCGACGCCTCCCGCGAAACCATCCGGAGAGACCTTTCCAACCTCGATGCGCTGGGTCGCCTGAAGAAGTTCCACGGTGGCGCCCGGGTCCGGTCGAACCCGTCGGTGGTGGAGCCCTCGGTCGAGGGGCCTTTCGCATTGCGCATGGCGGAGAACCTTACCGCGAAACGGCGCATCGCCTATGCCGCCGCCCGATTGCTTGCACCGGGAGATTCCGTGTTCCTCGATACCGGGACGACGACGGTGATCCTGGCGGAAGCGCTGGTCGACCTGCCGGCGCTAGTGGTCATCACCAATTCGTGGAAGATCGCGGCGACCGTATCGGCGAATGCCGATCACAAGGTCTTCCTGCTCGGCGGCGCCTATGGGGCGGATGCGGGGGAGACGCTCGGGCAGTTCGCGGTCGAGCAGGTGCGGAAGTTCCGGGCGCGCCACGCCTTCCTCACGGTCGGCGCGATCGACGGGCATTCGGTCATGGATTTCGACGCCCAGGTGACCGAAGTGGCGCAGACCATGATCGAGCGGGCGGAAACCGTCACCGTGCTCGCGGACAGTTCGAAATTCGGCAAGCACGGCATTTTCGAGGTGGCGCCGTTGTCGTCCATCGACAGGCTCGTGACGGAACAGGAG
PROTEIN sequence
Length: 238
VRPADRHERIVRLVHKAGEISVDELAQTLDASRETIRRDLSNLDALGRLKKFHGGARVRSNPSVVEPSVEGPFALRMAENLTAKRRIAYAAARLLAPGDSVFLDTGTTTVILAEALVDLPALVVITNSWKIAATVSANADHKVFLLGGAYGADAGETLGQFAVEQVRKFRARHAFLTVGAIDGHSVMDFDAQVTEVAQTMIERAETVTVLADSSKFGKHGIFEVAPLSSIDRLVTEQE