ggKbase home page

cn_combo_scaffold_11118_1

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(55..924)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEA0BC related cluster n=2 Tax=unknown RepID=UPI0003CEA0BC similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 289.0
  • Bit_score: 239
  • Evalue 3.60e-60
Marine sediment metagenome DNA, contig: S01H1_L06191 {ECO:0000313|EMBL:GAF72655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 289.0
  • Bit_score: 250
  • Evalue 2.90e-63
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 291.0
  • Bit_score: 225
  • Evalue 2.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 870
ATGTCCGAGCTAACAGGTATTTGTGTCGCCCTCTGCACGGCAATGAACGACGACGGAACGGCATTGGCCCCCGATCGCATGAAAAAGCATATCGACACGATGCTGGAAGCTGGCGTGCATATCGTCGCGATGTGTGGAGGTACGGGCGAGTTTCCTTTCCTGAGCACCGAGGAAAAGCGCGAGATAACTGAACTGGCCGCACGGCACATCGACGGCCGCGCGAGGCTGATCGTGCAGACCTCAGCGATCCGCACCGAGGACGCCGTCGAGGCAGCCCGTCACGCCGAGGGCGTTGGCGCTGACGCCCTGCTCGTCTTGCCGCCATACTTCGAAGGGCCGACTGCCGACGGCGTCTACAGCCATTACGAGAAGATCGGCGAGAAAGTTCGCGTACCGATCATGGCTTATAACGTTCCGGTCCACTCTGGCTTCGATATCACCCCGGAGTTCTTCAAGCGGCTGCAACAGATCGACAATGTGCAATACATCAAGGACACCAGCGGCAACTTCGTGCGCGTGCAAGAACTCCTGGTCAGCGGTGCAAAGGTCTTCAACGGCTCAGATCCCTTTGCGTTTCACGCTCTGATCGCAGGCGCGCAAGGGTGTTTTTGGGGTGCAGCCAATGTCATGCCGCGACAGGCCGTGGAGCTTTACCGCCTGGTGCAGGAAGGCAACGCCAGCGAAGCGATCGCCCTTTGGAAACAGATGCTTCCCGCAAATCTGTTTTTCTGGAACCACCCCTACAACCCGTCCATCAAGGCGGCGACAAATCTGCTGGTCAATACGGTGGGCGCGTGCCGTCAACCGGTCCAGCCTCTGTCCGAGGCGGAACTCGAGGGGCTCAAGGCCGCTCTGGAACCTCTCCGATAA
PROTEIN sequence
Length: 290
MSELTGICVALCTAMNDDGTALAPDRMKKHIDTMLEAGVHIVAMCGGTGEFPFLSTEEKREITELAARHIDGRARLIVQTSAIRTEDAVEAARHAEGVGADALLVLPPYFEGPTADGVYSHYEKIGEKVRVPIMAYNVPVHSGFDITPEFFKRLQQIDNVQYIKDTSGNFVRVQELLVSGAKVFNGSDPFAFHALIAGAQGCFWGAANVMPRQAVELYRLVQEGNASEAIALWKQMLPANLFFWNHPYNPSIKAATNLLVNTVGACRQPVQPLSEAELEGLKAALEPLR*