ggKbase home page

cn_combo_scaffold_1077_24

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 28049..29014

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y053_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 344
  • Evalue 1.20e-91
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 344
  • Evalue 3.30e-92
  • rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ACB35334.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 5 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 344
  • Evalue 1.60e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGAGCAAGCGGTTCATCAAGCAGCTCTGCACCACGACGCCTTTCTGGCGGCTGTTCGCGGGCGCACTGCGGCCGCAAGGCCTCACGGTGCTGATGTACCATCGCATCGTGGCGCCCGGCGACGCATTCCCGGGTACCCCCGTCGGGCAGTTCCGCGCCCAGATGCAGTGGCTACGCAGGCACTGCGAGCCGATCGCGCCCGAGCACTTCGAAGAGTCCCTGCTGGTCTCGAGCTGGGCGAAGCCGCCCGTGCTGGTCACCTTCGACGACGGCTACCGCGACTATCATGACAACGCCTACCCGATCCTGCGCGAACTGGATATCCCGAGCGTAGTGTTCCTGGCGACGTCGTTCATCGACGACGGCGGCCTGATCTGGACCGACGCGGTCACCTGGGCATTTCGCACCACGGCCTGCACCGAGTTCGTCGTCCCCTGGGAGCCCGACGTGGTCCTCGCGATCGACGACGCGTCGACGCTCGAGCGGTCGGAGTTGCGCTGCAAGCACTTCCTCAAGGGCGTTCCGGACATCGAGCGCATGCGTTGGGAGCGCGAGCTCTACACGGCACTCGGCGTGGAACCGCGAGCCAGCGCGCCGGGCAGGCAGATGCTCGACTGGAACGAAGTCCGCAAGACCGCGGACTTGACCCGCTACGGCGGCCACACCCACACGCACCCGATTCTGTCCCAGCTGGACAGTCAGCGCATGGAGGACGAGATCCGCCTGTGCCGCGAGCGCATCGAGCGGGAAACCGGCGTTGCTCCACGCTACTTCGCCTACCCGAACGGCCGCGCCCAGGATTTCAACGACGAAACGAAGACGCTGCTGCGCAAGCACGGGTTCGAGCTGGGCTTTTCCACGGTGGAAGGCATCCACCGGCGGGGCATGGATCCGTTGGCGATCGTGCGCCAACCAACCGGCAGCCGAACGCTCGGCGATTTCGCGTTCATCGTTGCGGGACGCTAG
PROTEIN sequence
Length: 322
MSKRFIKQLCTTTPFWRLFAGALRPQGLTVLMYHRIVAPGDAFPGTPVGQFRAQMQWLRRHCEPIAPEHFEESLLVSSWAKPPVLVTFDDGYRDYHDNAYPILRELDIPSVVFLATSFIDDGGLIWTDAVTWAFRTTACTEFVVPWEPDVVLAIDDASTLERSELRCKHFLKGVPDIERMRWERELYTALGVEPRASAPGRQMLDWNEVRKTADLTRYGGHTHTHPILSQLDSQRMEDEIRLCRERIERETGVAPRYFAYPNGRAQDFNDETKTLLRKHGFELGFSTVEGIHRRGMDPLAIVRQPTGSRTLGDFAFIVAGR*