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cn_combo_scaffold_1618_7

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(6847..7545)

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AP95_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 243.0
  • Bit_score: 150
  • Evalue 2.30e-33
type-F conjugative transfer system pilin assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 243.0
  • Bit_score: 150
  • Evalue 6.50e-34
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:AEF88714.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Co similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 243.0
  • Bit_score: 150
  • Evalue 3.20e-33

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGCCGGCGCGTACTGAGATCCGCGCCATCGTGGCGGCCGCCTGCGCGCTCGGGTTGCTCGCCGCGGGCATCGCGCTCGCCCAGGCGCCGCGCTGGCCCGATGCCGACGACATCGAGCGGGCACGGAAAGTCCACCCCTTCCCGCAAGCCGATCGTCTCGGTGCCCAACCGGTGACCGCGCCGCCGCGCGTGAACCTGCCGTCGACGGCGGCACCTACCGACATCGAAGCACTCGCCCGGGCTGGCGCGCGACTCGGCAGCCCGTCCGCACAGGCCACGGCCGCGAGCCCGCTTCGCATCTTCATCACGCTGGAGATGCCCCGCGCGAGCCTGCAGCTGCTGACCGATCAGGCCGCGCGCAGCGGCGCGGTCCTCGTGCTGCAGGGCATGAAGGCAAACTCGATGCGCGAGACCCTCGCAGCCGTCTCCAGCCTGATCGGCGAGCGTCAGGTGGCGTGGGTGATCGACCCCGAAGCCTTCGCACGCCATCGCATCGAACGCGCGCCGACCTTCGTGCTGAGTCTCGACGATCGCGCCGACACGGCGACGAGCTGCAGCACGGACTGCCGCGCGCCGCCGGCCTTCGTCAGCGTGTCGGGAGACGTGAGCCTCGACCACGCGCTGGACACGCTGGCCAGGCAGCGCCCCGAAGCGCGACCGCTCGTGGCGCCGCTGCTCGCGCGGCTGAAGGGCTCCTGA
PROTEIN sequence
Length: 233
VPARTEIRAIVAAACALGLLAAGIALAQAPRWPDADDIERARKVHPFPQADRLGAQPVTAPPRVNLPSTAAPTDIEALARAGARLGSPSAQATAASPLRIFITLEMPRASLQLLTDQAARSGAVLVLQGMKANSMRETLAAVSSLIGERQVAWVIDPEAFARHRIERAPTFVLSLDDRADTATSCSTDCRAPPAFVSVSGDVSLDHALDTLARQRPEARPLVAPLLARLKGS*