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cn_combo_scaffold_1618_22

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: 19395..21392

Top 3 Functional Annotations

Value Algorithm Source
conjugative coupling factor TraD, TOL family id=12497086 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 673.0
  • Bit_score: 717
  • Evalue 1.40e-203
Type IV secretory pathway, VirD4 components similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 660.0
  • Bit_score: 710
  • Evalue 4.70e-202
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22213.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 660.0
  • Bit_score: 710
  • Evalue 2.30e-201

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Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
ATGGCCTATCCGTTGGAGGCCCGGCTGCGGCCGGCGCACGAACTCGGCGCGGCCTGCGTGTCGGCGCTGGGCGCGGCGATGGTGTTGAGCAGCCCGGGACTCTTCCTGGTCACACCGCCTTGGCACTTCGCGCTGGCCGGGGCGCTGCTCGGTCACGCATTGTGGCGCGGGACGGCCGGGCTGCGGACCTTGCGCTATCGCGTGAACCTGCAGCGCCGTCGGCGCTACGAGCTGAGCTCGGCGGAGATCCCTTGGTCCACCGAGCGACTCTTCCTCGGGCGCGGGTTTCGTTGGGATCAGCGTCACACGCAGCGCTTGTACGAAGCACGCCTGCCGGCGAACCGGCCGCTCCTTCGAGGCGGCCCGCTCGCGGGTGTATTGACTGGCTTCGTGCCGGCGGCAGATTCAAGCAGCGTCGGCGGCGATCCCGGCATCCACGGGGTCGAACCCGACGAGAGCGAGATCTGGATGGATCTTGAAGACCGCGTCGGACACACGCTGGTGTTGGGAACCACGCGGGTCGGCAAGACGCGCCTCGCCGAGCTGTTGATCGCCCAGGACATCCGCCGCGGCGAGGTTGTGGTCGTGTTCGACCCCAAGGGTGACGTCGACCTGCTGCGCCGTGTGTTCGCCGAAGCCGAGCGGGCCGGGCGCGCGGGAGAGTTCTTCATGTTCCACCTCGGCCACCCGGAGATCTCGGCGCGCTACAACCCAGTGGGCAGCTTCTCGCGCATCACCGAGGTTGCCACCCGCATCGCCGGCCAGCTGCCCTCGGAAGGACAGTCGGCGGCGTTCAAGGAGTTCGTCTGGCGCTTCGTGAACGTGATGGCCCGTGCGCTCGTGGCGCTCGGTCGCAAGCCCGACTACCAGGAGATCAACCGCTACGCCTCCGACGTCGAGCCGCTGCTGATCGACTACTTCGAGTACTGGCTCGACCGCGAACCCTCTGCTTCAGGCTGGCGCGACGAGCTGCGGTCGCTGGCCATCGACAAGAAGAACCTCGACAAGGGCCTGCAGTCGCGCGGCGCGCGGGCAGTGAGCCTGGTGGAGTACGCGCGGCGCAAGAAGCTCTACGACCCGATCGCCCACGCGCTCGCCTCGACGCTCAACTACGAGAAGAGCCACTTCGACAAGCTGGTGGCGTCTCTGCTGCCGTTGATGGAGAAGCTCACCACCGGTCGCACGGCCGCGCTGCTCTCGCCCGAGCTCGACGATCCGACCGACTGGCGCCCGGTGTTCGACTGGACGTCCGTGATCCACCTTGGCGGCATCGTCTACGTCGGGCTCGACGCGCTGTCCGACTACGAAGTGGCCGCGGCGGTGGGCAACTCGATGTTCGCCGACCTCACCAGCGTGGCCGGCAGCCTCTACAAGTTCGGCACAGGCCGCGGACTGCCGGGCGAGGTGAAGCCGCGGCGGATCGCGATCCACGCCGACGAGTTCAACGAGCTGATCGGCGACGAGTTCATCCCGCTGCTCAACAAGGCGGGCGGGGCGGGGTTCCAGGTGACGGCCTACACGCAGACCTGGTCGGACGTGGAGGCGCGCATCGGCTCGCCGGCCAAAGCGGGGCAGATCGCCGGCAACTTCAACACGCTGATCATGCTGCGGGTGAAGGAGGTGGCGACGGCCGAGCTGCTGACCAGCCAGCTGCCCGAAGTGCACGTCGTCTCGACCGTGGTGTCGTCGTCGGTCTCCGACACCAACGACCCGATCGACTTCGCGGACTTCGCCAGCCGCAACGAGGACCGCATCGCGCCGGAGACGGTTCGGATGCTCGAACCGACCGACCTGGTGCAACTGCCCAAGGGCGAGGCCTTCGCGCTGATCCACGGCGGCCAGCTGCACAAGATCCGCATGCCGCTGCCCTCGGCAGCGAGCGATGCGCTGATGCCGACGAGCCTGGCGGCGATCGGGAAGACGCTGAGAGCGCGGCTCGACGGACCGTGGAATCAGCCGGAAATTGGCTTCGAGGCGGGGGAGCGGCGTGTCGTCTAG
PROTEIN sequence
Length: 666
MAYPLEARLRPAHELGAACVSALGAAMVLSSPGLFLVTPPWHFALAGALLGHALWRGTAGLRTLRYRVNLQRRRRYELSSAEIPWSTERLFLGRGFRWDQRHTQRLYEARLPANRPLLRGGPLAGVLTGFVPAADSSSVGGDPGIHGVEPDESEIWMDLEDRVGHTLVLGTTRVGKTRLAELLIAQDIRRGEVVVVFDPKGDVDLLRRVFAEAERAGRAGEFFMFHLGHPEISARYNPVGSFSRITEVATRIAGQLPSEGQSAAFKEFVWRFVNVMARALVALGRKPDYQEINRYASDVEPLLIDYFEYWLDREPSASGWRDELRSLAIDKKNLDKGLQSRGARAVSLVEYARRKKLYDPIAHALASTLNYEKSHFDKLVASLLPLMEKLTTGRTAALLSPELDDPTDWRPVFDWTSVIHLGGIVYVGLDALSDYEVAAAVGNSMFADLTSVAGSLYKFGTGRGLPGEVKPRRIAIHADEFNELIGDEFIPLLNKAGGAGFQVTAYTQTWSDVEARIGSPAKAGQIAGNFNTLIMLRVKEVATAELLTSQLPEVHVVSTVVSSSVSDTNDPIDFADFASRNEDRIAPETVRMLEPTDLVQLPKGEAFALIHGGQLHKIRMPLPSAASDALMPTSLAAIGKTLRARLDGPWNQPEIGFEAGERRVV*