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cn_combo_scaffold_5140_10

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(9111..10244)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK10_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 373.0
  • Bit_score: 400
  • Evalue 2.10e-108
membrane-fusion protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 377.0
  • Bit_score: 624
  • Evalue 7.30e-176
membrane-fusion protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 378.0
  • Bit_score: 364
  • Evalue 4.70e-98

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGCTTTACCGTTTTTCCCGGCTGGCGCTTGGTCGCCTGGCCGTGCTCGTCTCCCCCTGTCTGATTGCTGCTGCTCCGCTGGCTGCCATTGCGGCTGACGAGTTTCCCGTCACGGCTGCACAGATGCAGTCCTTGGGCGTGCAAGTGCAACGCCTTGACAAAGCTGGCGACTCTTCTGGGCAGACCTATTCCGCTCGTGTCGTGCTCGCACCAGGCCAGGAACAACTGGCCAGTGCCCCTCTCGCCGGCGTCGTTGACCAACTGCTGGTCGCCGAGAACGACTCGGTCAAAGCCGGACAGCCGCTTTTGCGTCTGATCAGTCCCGAGCTCGGCGAATTGCAATTGAAGCTGATGGAGGCGGATTCGAGCAGTCGCCTCTCACAAAAGACACTGCAGCGTGAACGTCAACTTTTCTCGGAAGGCATCATTCCTGAACGGCGCGTGCAGGAGGCAGAAGCCGCAGCGGCCCAAAACAATGCCCGAAAGCGGCAGGCAGAGGCCGCATTGCGTCTGGCCGGCCTCGACAGTGCACGGATTCGTCGCGTCTCCGAAGGGGGCAACGTCGAGTCGACGGTTACCGTCAGCGCAAAGGCCGCCGGTCAGGTGGCCGAGCTGTCGGTCAAGCCGGGCCAGCGCGTTCAACAGGCAGACATGCTGCTGCGCATTGCAAATCCGAGCAAGCTGGGGCTGGAAATCCAGATTCCGTCTGTGCGCAACTCGCAGGTTGCAACATTAAAAGGCGCACCCATCACTGTGATCGGACGCACCGGCGTACAAGGCGAGGCACTGAGCGTTGGCCAGGCAGTCAGCGACAACCAGATATTGACGCTCAGAGCAGCTATCACCAAAGGATCCGAACAGCTGCGACCGGGAGAAATCGTGCAGGTGCAGGTCCCATTCGCCGACGCGGCCGACGGTTGGTCCATTCCTCTGCAGTCGGTCGCGCGCCAGGGGGATAAGGCGTACGTCTTCGTCCGTACGGACAAAGGTTTCGTTGCAACTCCGGTCACGGTTCTGGCAAGCGCTGGGCAGACGGTACGTGTTGCGGGCGCACTGCAGGCCGGCCAAGAAGTCGCCACGGCCTCCGTGATCGCACTGAAGGCGGCGTGGCAGGGCAAGGGCGGGAGCAACTGA
PROTEIN sequence
Length: 378
MLYRFSRLALGRLAVLVSPCLIAAAPLAAIAADEFPVTAAQMQSLGVQVQRLDKAGDSSGQTYSARVVLAPGQEQLASAPLAGVVDQLLVAENDSVKAGQPLLRLISPELGELQLKLMEADSSSRLSQKTLQRERQLFSEGIIPERRVQEAEAAAAQNNARKRQAEAALRLAGLDSARIRRVSEGGNVESTVTVSAKAAGQVAELSVKPGQRVQQADMLLRIANPSKLGLEIQIPSVRNSQVATLKGAPITVIGRTGVQGEALSVGQAVSDNQILTLRAAITKGSEQLRPGEIVQVQVPFADAADGWSIPLQSVARQGDKAYVFVRTDKGFVATPVTVLASAGQTVRVAGALQAGQEVATASVIALKAAWQGKGGSN*