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cn_combo_scaffold_12250_3

Organism: CN-SCN_Lautropia_89x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1141..1701

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreB n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E12EBE similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 184.0
  • Bit_score: 255
  • Evalue 4.10e-65
greB; transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 184.0
  • Bit_score: 255
  • Evalue 1.50e-65
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 184.0
  • Bit_score: 255
  • Evalue 7.50e-65

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Taxonomy

Collimonas fungivorans → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAGCAAAGCCTTCGTGAAAGACGAGGCGGCCGACGAGGCCGACGACATCGACGCTGCGGCGCAGGCGCTGCCGCCGGCGGCGGGCGGGCGCAACTACATCACGCGCGCGGGCTACGAGCGGCTGAAGGCCGAACTGCTCGGGCTGATCGACGTCGAGCGGCCCGAGGTCGTGCGCGTCGTCTCGTGGGCGGCCTCGAACGGCGATCGCTCCGAGAACGGCGACTACATCTACGGCAAGAAGCGGCTGCGCGAGATCGACCGGCGCATCCGCTTCCTCACCCGACGGCTCGATCTTGCCGAGGTGGTCGATCCGGCACTGCAGCAAGGCTGCGAGCAGGTGTTCTTCGGCGCCACGGTTACCTACCTGCGCAACGGCGAACGCGAGGAGACGGTGCGCATCGTGGGCATCGACGAGGTCGATCCGGCGCGTGGGTACGTGAGCTGGATCTCGCCGGTGGCGCGCGCGCTGCTCAAGGCGCGCGAGGGCGACGTGGTGACGCTGCGCACGCCGGCAGGCGTGGACGAACTCGAGGTGCTGGGAATCAGCTACTGCGACTGA
PROTEIN sequence
Length: 187
MSKAFVKDEAADEADDIDAAAQALPPAAGGRNYITRAGYERLKAELLGLIDVERPEVVRVVSWAASNGDRSENGDYIYGKKRLREIDRRIRFLTRRLDLAEVVDPALQQGCEQVFFGATVTYLRNGEREETVRIVGIDEVDPARGYVSWISPVARALLKAREGDVVTLRTPAGVDELEVLGISYCD*