ggKbase home page

cn_combo_scaffold_548_1

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 2..712

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEEEA5 related cluster n=1 Tax=unknown RepID=UPI0003CEEEA5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 459
  • Evalue 1.80e-126
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 459
  • Evalue 5.10e-127
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyll similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 236.0
  • Bit_score: 459
  • Evalue 2.50e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC220B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
GAAATGGTCGAGGCGAACCTCCGTCTCGTCATCTCCATCGCCAAGAAGTACACGAACCGCGGCCTGCAGTTCCTGGATCTGATCCAGGAAGGCAACATAGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTATGCCACCTGGTGGATCCGGCAGGCGATCACCCGTTCGATCGCCGACCAGGCCCGCACCATCCGCATCCCGGTGCATATGATCGAGACGATCAACAAGATCGTCCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACGCCGGAAGAACTGGCCGAAAAGCTCGCCATGCCGCTCGAGAAGGTGCGCAAGGTGCTGAAGATCGCCAAGGAGCCGATCAGCCTCGAAACGCCTGTGGGCGACGAGGAGGATTCGCACCTCGGCGATTTCATCGAGGACAAGATGGCGATCCTGCCGATCGACGCGGCGATCCAGGCAAACCTGCGCGAGACCACCACGCGCGTGCTCGCCTCGCTCACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACCCTCGAAGAGGTGGGCCAGCAGTTCTCGGTCACCCGCGAACGTATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTCAAGCACCCAAGCCGCTCGAGGAAGCTCAGAAGCTTCCTGGACAGCTAA
PROTEIN sequence
Length: 237
EMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKMAILPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDS*