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cn_combo_scaffold_548_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7618..8220)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F8CC1 similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 196.0
  • Bit_score: 321
  • Evalue 5.00e-85
Putative transcriptional regulator {ECO:0000313|EMBL:CDX31072.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 197.0
  • Bit_score: 278
  • Evalue 8.90e-72
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 198.0
  • Bit_score: 272
  • Evalue 1.30e-70

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAAGAGACGGCCGGACGGCGCTCAAACCGCGATCGAACCGAAGCGACCCGCGCCCAGCTGATCGCTGCGGCGCGAAGGCTGTTCTCCGAAAAATCCTATGCCGAGACGAGCACGCCGGAGATCGTGGCCGCCGCCGGCGTGACGCGCGGCGCGCTCTACCATCACTTCGCCGACAAGCAGGCGCTGTTCCGCGCAGTGGCGGAGGAAGAAGCGGCGACAGTTGCGACGGAGATCGAGCATGCCGCGCCCGACGACATGGATGCACGCGCAGCCCTCGTCGCCGGCAGCAAGGCCTATCTCGAGGCGATGCAGGCGCCCGGCCGCACCAGGCTCCTGCTGCTCGACGGACCGGCGGTCCTCGGTCGCGCTGGCATGGACGAGATCGACGCCCGCCACGGCACGCGCACCCTGCGCGAGGGGCTGGCGATCGCCATGCGCGCCGGTGCGATCCACAAGTTGCCCCTGGCCGCCCTGACCAGCCAGCTCGCCGCGGCCTTCGACCGCGCCGCGCTCGCAGTCGATGCCGGCTCGCCACTGGCCGAGCAGATGGAGGTCATCACCGCGTTGATCGACGGCTTGATGTTGGCGCGGCTCACTTGA
PROTEIN sequence
Length: 201
MQETAGRRSNRDRTEATRAQLIAAARRLFSEKSYAETSTPEIVAAAGVTRGALYHHFADKQALFRAVAEEEAATVATEIEHAAPDDMDARAALVAGSKAYLEAMQAPGRTRLLLLDGPAVLGRAGMDEIDARHGTRTLREGLAIAMRAGAIHKLPLAALTSQLAAAFDRAALAVDAGSPLAEQMEVITALIDGLMLARLT*