ggKbase home page

cn_combo_scaffold_548_28

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(22533..23585)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTX6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 350.0
  • Bit_score: 618
  • Evalue 4.50e-174
ABC transporter permease {ECO:0000313|EMBL:ESX83249.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 350.0
  • Bit_score: 618
  • Evalue 6.30e-174
Arabinose/arabinan permease similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 344.0
  • Bit_score: 584
  • Evalue 2.00e-164
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAGCAATGTCGTTGCCTTCCTGACGCGCCGTCGTGGCGGCCGTGGCTGGCACTGGACCGACGTCTTCATGTGGGCCTGGCTGATCGGCGCGCTGGTGCTGATGTTCGGCCCCGCGCTCTGGCTGGCGCTGTCGTCGTTCAAAACGCCGGCGCAACTGGCGGAATTCCCCCCAACCCTGCTGCCCTACGCCACGCAACAGGCGACGGTTGAGGGATATGACAAGCCGCTCAACCTCTTCACCACCAAGCTCCCGGATGGCACGACCAGGGTCATGGCCGAGGTCCGCCGCGTCGGCACCGTCTCGCAGCTTGTCGATCCAAAGGCCCCGAGCGAGATCGTCAAGGTCAACATCGCCGACCGGCAGCCGGTGCGCGAGATCCGGTTCGCGACCGAGAACTACACGCAGCCCTTCGAGCATTTCGACTTTCTGCAATATCTGAAGAACTCGGTTTTCGTGACCGTGGTGGCGACGCTGATCACGTTGCTCACCAATTCCATGGCCGCGTTCGCGCTGTCGAAATACCAGTTTCGCGGACGCAATCTGGTGCTGCTTCTCATCGTCGGCACATTGATGGTGCCGTTGTCCGTCCTCCTGGTCCCGCTCTATTCCGTCATCAGCGCGGTCGGACTGTTCGACTCGCTCTGGGGTGTCATATTGCCCACCGTTGCGACTCCGACGGGCGTGTTCCTGCTGCGCCAGTACATGTTGACCATCCCGGACGAGTTGATCGACGCGGCACGCATGGACAATGCGTCCGAATGGCAGATCTACTGGCGGATTGTCCTGCCGCTCGCCGCTCCGGCCCTGGCGGTGCTCGCCATCTTTTCGGTGGTCTGGCGCTGGAACGATTTCCTGTGGCCGCTGGTCGTGCTGTCACGCAAGGAGCTCTACACATTGCAGGTCGGGCTCAACACCTATGCGGGCGAGTTGAACGTGCAGTGGCACTTCATTCTGGCCATGACGGTGGTGACCATGATTCCGGTCGTGCTGGTCTTCATCTTCCTGCAGCGCTACATCACCGCCGGCATCGCCGGGACCGGCTTGAAGTAA
PROTEIN sequence
Length: 351
MSNVVAFLTRRRGGRGWHWTDVFMWAWLIGALVLMFGPALWLALSSFKTPAQLAEFPPTLLPYATQQATVEGYDKPLNLFTTKLPDGTTRVMAEVRRVGTVSQLVDPKAPSEIVKVNIADRQPVREIRFATENYTQPFEHFDFLQYLKNSVFVTVVATLITLLTNSMAAFALSKYQFRGRNLVLLLIVGTLMVPLSVLLVPLYSVISAVGLFDSLWGVILPTVATPTGVFLLRQYMLTIPDELIDAARMDNASEWQIYWRIVLPLAAPALAVLAIFSVVWRWNDFLWPLVVLSRKELYTLQVGLNTYAGELNVQWHFILAMTVVTMIPVVLVFIFLQRYITAGIAGTGLK*