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cn_combo_scaffold_548_34

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 30477..31547

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FRF2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 356.0
  • Bit_score: 501
  • Evalue 8.20e-139
LacI family transcriptional regulator {ECO:0000313|EMBL:ESX83243.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 356.0
  • Bit_score: 501
  • Evalue 1.10e-138
reg1; HTH-type transcriptional regulator Reg1 similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 343.0
  • Bit_score: 437
  • Evalue 4.10e-120
  • rbh

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Taxonomy

Mesorhizobium sp. LSHC420B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGGACGGCAAGCGCGGAAGGCCGAACCGCAGGGTGCGGCTTGAAGAAGTGGCCAAGCGCTGTGGCGTGTCGGTCAGCACTGCCTCGCGCGCGCTGACTGGTGCGGCAGGTGTCCGCGAGCCCATGCGTGCGGCAATCATCGAGGCCGCGCGATCCCTCAGCTACGCGATGCCGACCTCGGTCGTCGGCCGCAAGGTGATCGTCGCGGCAAGCAGCGCTGCCATGATCGACAATTCGCGCTCCCAGTTCACTTTCCATGTGCTCGACGGCCTCAACGAGCGCGCGCGTGTGCTGGGGGTGGAGCTTGCCACGCGGCCGGTGGCTGGTCCCGAGGACGAACTGGCGCTGTTGCGCGATGCGGAAGCCGACCCCTCGGTCGCCGGCTGCCTGTTCCTCACGCTCGAGGACGACATGCTGCCGCTCACGCACGGGTTTTCCAAGCCCATCGTACTGATCAACGGCGACGATCCGTCCATGCGCCATTCGAGCGTTACCCCCTGCAACAGGGCGGCGGCACAGTTCGCTGCCACGCATCTGCTGCAGCTTGGCCATCGGCGCATTCTCTTCCTGATGCGGCGCGGGCGGCGCACCATCGAACGCCGCTTCGAAGGCTGGCGCGACGCACTGACGGCGAAGGGTGTAGGCGCCATCGAAGACCTGGTGGTGGAGGTGGACGACTGGTTGCCCGAGCTTGCGGCGGCGGCGATCGCGCGGCGCATCGAGGCTCGAGGTGTGGATTTCACCGCCGTCCTCACCGCCGGCGACAGCCTGGCTTATGGCGCCATCCTGGGGCTGGAGCAGAAAGGTGTCGCGGTGCCCGAAGAGGTGTCGGTCATTGGCATGGACGATCTGCCGCAATCGGCCTTCTGCAGTCCGCCGCTGACGGCCATGCACATCCCCATGCGCGAACTGGGGTCGGTGGCGCTCAGCCTGCTCCTGGATCATCTGGGTGGCGGCCCGATGCTGGCACGCCGCGTCGAACTGGCTTGCAGGCTGGTCGAAAGACAGTCGACGGCGCCGGTCCGCAAGCATCGCCTTGACCTTCAGGCGTCAGGCGCGAAGAGCCGGTAG
PROTEIN sequence
Length: 357
MDGKRGRPNRRVRLEEVAKRCGVSVSTASRALTGAAGVREPMRAAIIEAARSLSYAMPTSVVGRKVIVAASSAAMIDNSRSQFTFHVLDGLNERARVLGVELATRPVAGPEDELALLRDAEADPSVAGCLFLTLEDDMLPLTHGFSKPIVLINGDDPSMRHSSVTPCNRAAAQFAATHLLQLGHRRILFLMRRGRRTIERRFEGWRDALTAKGVGAIEDLVVEVDDWLPELAAAAIARRIEARGVDFTAVLTAGDSLAYGAILGLEQKGVAVPEEVSVIGMDDLPQSAFCSPPLTAMHIPMRELGSVALSLLLDHLGGGPMLARRVELACRLVERQSTAPVRKHRLDLQASGAKSR*