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cn_combo_scaffold_548_45

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 42298..43578

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI0003675BF0 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 426.0
  • Bit_score: 774
  • Evalue 6.00e-221
Strain MEJ076 contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ00593.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 426.0
  • Bit_score: 770
  • Evalue 1.20e-219
TRAP dicarboxylate transporter permease protein DctM subunit similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 426.0
  • Bit_score: 768
  • Evalue 1.20e-219
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGGAACTCTGGGTTCTCTTCGGCTCCTTCACCCTGCTGATGCTGATCGGCACTCCGATCGCCTTCTGCCTCGGTGTGGCTAGCCTTGCCACCGTCCTCTACATGGGCCTGCCGCCGCTGGTCGTGTTCCAGCGACTCAACTCCGGCATGAGCGTATTCTCGCTGCTTGCCATCCCGTTCTTCATCTATTCCGGCGACCTGATGGTGCGGGGCGGCATCGCGCAGCGCATCGTCGCCTTCGCGGCGTCGCTGGTCGGCCACATCCGCGGCGGCCTGGGACAGGTCAACATCGTCACCGCTACGCTGTTCGGGGGCATTTCCGGATCGGCCGTGGCCGAGGCGGCAGCGGTCGGCGGCCTCATGATCCCACAGATGAAGGCGCGAGGCTATGGAGCCGATTACGCGGTCAACGTCACCTCGATGGCTGCCCTGATCGCGTTGCTGCTGCCGCCGTCGCACAACATGATCATCTATTCCATCTCGGCGGGCGGCAAGATTTCGATCGCCGACCTGTTTACCGCGGGCGTCATCCCGGGCCTTCTGCTCGCCGCTTCGCTGATGGTCACCGCCTATCTCGTGGCGCGCAAACGCGGCTACCCGACCGAACCGTTCCCCGGGCTCATGGCGGTCGCGCATCTTCTTGCCGTCGCGGTGCCGGGCCTGCTGCTGATCGCCATCATCTTCGGCGGCGTGCGCTCCGGCATCTTCACTGCCACCGAAAGCTCGTGCATTGCGGTGATCTACGCGCTGATGGTGACGTTGTTCGTCTACCGCCAGCTGAGCTGGAGCGATTTCGTCCACGCCACGATGGGTGCAGTGCGTACCACAGCGATGGTGCTTCTCATAATCGGCACGGCCGCCGCCTTTTCCTGGCTCATGGCGTTCCTGCGCGTGCCGGCGAGCCTGGTGGCATGGATGCAGACGATCTCGGACAACCCGATCATCATCCTGCTCCTGCTCAACCTGATCATGCTTCTGCTCGGCACCTTCATGGACATGGGGCCGACCATCATCATCACCACTCCGATCTTCCTGCCGATCGCGCAAGCCTACGGCATCGATCCCGTGCATTTCGGCGTCATCATGATCCTGAACTACGGCATCGGCCTGAACACGCCGCCGGTCGGAGGAGTGCAGTTCGTCGCCTGTGCGGTGGGCAAGATCAGCGTCTGGGAAGCGATGCGGTCGATCTGGCCGTTCTATGGCGCCGGCCTCGTGGTGCTGCTACTCGTGACCTATATCCCGGCCATATCGCTCTGGCTTCCCAACGCATTCAGGTAG
PROTEIN sequence
Length: 427
MELWVLFGSFTLLMLIGTPIAFCLGVASLATVLYMGLPPLVVFQRLNSGMSVFSLLAIPFFIYSGDLMVRGGIAQRIVAFAASLVGHIRGGLGQVNIVTATLFGGISGSAVAEAAAVGGLMIPQMKARGYGADYAVNVTSMAALIALLLPPSHNMIIYSISAGGKISIADLFTAGVIPGLLLAASLMVTAYLVARKRGYPTEPFPGLMAVAHLLAVAVPGLLLIAIIFGGVRSGIFTATESSCIAVIYALMVTLFVYRQLSWSDFVHATMGAVRTTAMVLLIIGTAAAFSWLMAFLRVPASLVAWMQTISDNPIIILLLLNLIMLLLGTFMDMGPTIIITTPIFLPIAQAYGIDPVHFGVIMILNYGIGLNTPPVGGVQFVACAVGKISVWEAMRSIWPFYGAGLVVLLLVTYIPAISLWLPNAFR*