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cn_combo_scaffold_972_40

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(39743..42595)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1107882 species="Bacteria; Proteobacteria; Al similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 976.0
  • Bit_score: 1255
  • Evalue 0.0
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B34B3 similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 925.0
  • Bit_score: 1255
  • Evalue 0.0
ribonuclease, Rne/Rng family similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 998.0
  • Bit_score: 1251
  • Evalue 0.0

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2853
ATGCCCAACAAGATGCTGATAGACGCCTCCCACCCGGAGGAAACACGGGTTGTCGTAGTTCGCGGTAACCGTATTGAAGAATTCGATTTCGAATCACAGGACAAGAAGCAGCTCAAAGGAAACATCTACCTCGCCCGCGTGACGCGGGTCGAACCGTCCCTGCAGGCTGCCTTCGTCGAGTATGGCGGGAACCGTCACGGCTTCCTGGCCTTCAGCGAAATCCATCCCGACTACTACCAGATCCCCGTCGCCGACAGGCAGGCCCTGCTGCGCGCCGAGGCCGAAGAGGCCGAAGACGAGGATGAGGACGAGGAGAACGGTGAGGAGCGCCAGGACCGCAACCGCGGCCGGCGTCGCCGTCGTGGTGGAAAAAACCGTGGAAAAAGCGGCGACGACCACAAGTCGGAGGCTTCGGCCGACGACGAGAATGCCGCGCCCTCCGGCGAAGACACCGAATCGGCGACTGCCGAAGACGCAACCGAGGCTGGTAGCCAGGCTGCGGAAGAGGTTGCTACGGAACAGCACGTCGAGGCCGCAAACGACGACGAGACGAGCGAACGCGAGCCCGGCTCCATCGCCGCGTCGGTCGACGCCGACGTCATTTCCGAGAAGGCGCCCGAGCCGACCGTCACGGAGAACGACAATGGCGGCGTGATCGAGGAGGTCCACTCCGATCATCACGAGGACCACGAGATCGAGTCGGTCGGCGCCGAAGACGCGATCGAAGAGGCCCGCGACCGTCGCAAGCCGGTGCGCCGCCACTACAAGATCCAGGAAGTCATCAAGCGCCGCCAGATCCTGCTGGTGCAGGTGGTCAAAGAAGAGCGCGGCAACAAGGGTGCTGCGCTGACGACCTACCTGTCGCTGGCCGGCCGCTACTCCGTGCTCATGCCCAACACCGCCCGCGGTGGTGGCATCTCGCGCAAGATCACCAACGCCCAGGATCGCAAGCGCCTGAAGGAAGTCGTGGCGGATCTCGAAGTGCCGAAGGGCATGGGCGTGATCCTGCGCACGGCCGGCGAAAGCCGCACCAAGGCCGAGATCAAGCGCGACTACGAATATCTGATGCGCCTGTGGGAGAATGTGCGGTCGCTGACGCTGCAGTCGTCCGCTCCAGCACTCGTCTACGAGGAAGGCAGCCTCATCAAGCGTTCGGTGCGCGATCTCTACAACAAGGAGATCGACGAGATCCTCGTCTCCGGCGAGGACGGCTATCGCGAGGCCAAGGACTTCATGCGCATGCTCATGCCGAGCCATGCCAAGGCGGTCCAGCCCTACCGCGACAGCACGCCGATCTTCGCCCGCAACGGCATCGAGGCGCAGCTCGACAAGATGCTGCAGCCGCAGGTGACGCTGAAGTCCGGCGGCTACATCATCATCAACCAGACGGAAGCCCTGGTTTCCATCGACGTGAACTCGGGCCGGTCCACCAAGGAGCATTCGATCGAGGACACCGCACTCCAGACCAACCTGGAGGCGGCCGAGGAAGTCGCGCGCCAGCTCAGGCTGCGCGACCTTGCGGGCCTGATCGTCATCGACTTCATCGACATGGAGGAGAACCGCAACAACCGTGCGGTCGAGAAGAAGCTCAAGGACTGCCTGAAGAACGACCGCGCCCGCATCCAGGTCGGCCGGATCTCGCATTTCGGCCTGATGGAAATGTCGCGCCAGCGCATCCGCGCCAGCGTGCTCGAATCGACCATGAAGCCCTGCCCGACCTGCGGCGGCACCGGTCATGTTCGTTCGGATTCTTCGGTGGCGCTGCTCGTCGTCCGCGCGATCGAGGAATTCCTACTCAAGGATGCGCGCAACCACATCACCGTCAAGACGCCCGTCGCGACCGCGCTCTATGTGCTCAATCACAAGCGCGCAACGCTGGTCGAACTTGAGCAGCGTTTCGGCCTGACGATCACCATCGAGGCGGACGATTCGGTCGGTGCGCAGCACTACGCCATCTTCCGTGGCGCCGTCGCCGAAAAGCCTGTCGCTCCCACCCTGCCCGTCCAGGCGCCGGCCTATGCCGAGCCCGAGGAGGTCGAGGAAGACATCGTCGTCGAGGAAGACGAAGAGGTCGCCGACACCGCCGAAGCCCCGTCTTCGAGGCAGCAGCATGCGGCGAGCGAAGGTGACGACAAGCACGATCGCAAGCGCCGCAGGCGCCGCCGCCGCCGTGGCGGTCGCGATCGCGAACATGGGGCGCCCGTGGAAGGCGAAGCGGTAGCCGCAGAGGCGGAAGAGTCCGCCGAGGGCGAAGCCAGCGAAGGCGCGAGCGAAGAGGTTGTGTCCGAGCCGGTCGCAGCAGAGGCTGCAGCAACTGACGACGCTGCCGCCAAGAAGCGCCGGCGCGGCAAGCGCGGCGGCAAGCGCAACCGCAAGGACGGCGAAGAGGCGGCTGATGCGGAAGCAAACGAGGTAGCAGACGAGGTAGCTGCCGCGGAAGCAGTGGAAGCCGCGCCTGCCGTCGAGCTTGAGGCTGCCGTCGAGGTCCCGGTCGAGCCGACGCCTGCGGAAGAACCTGTGGCTGAAGCCAAGCCGAAGAAGCCACGCCGTTCCACCAAGGCCAAGAAGGCAGCTGAAGAGACCGCAGAGACGGTTGCCGAAGAGGCGCTTGCCCCTGCTACCGAACAGCCCGAGGCCGAGTCTGCCAAGAAGGCGGCGAAGCCGCGTGCTTCGCGTCGCAAGACGGCGGCAGCCCCGGTCGATGAAGTCGTGATGGTCGCTGAAGCGGTCGAGGAGCAAGTAGCTGTTCCGGCCAAGCCGGTCGTCACTTCGGTAGTTGAAGGCGATGCTGACGCCACTTCCGAGGCAAAGCCGAAGAAGGCAGGCTGGTGGCAGCGCAAGGGTTTCTTCTAA
PROTEIN sequence
Length: 951
MPNKMLIDASHPEETRVVVVRGNRIEEFDFESQDKKQLKGNIYLARVTRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYYQIPVADRQALLRAEAEEAEDEDEDEENGEERQDRNRGRRRRRGGKNRGKSGDDHKSEASADDENAAPSGEDTESATAEDATEAGSQAAEEVATEQHVEAANDDETSEREPGSIAASVDADVISEKAPEPTVTENDNGGVIEEVHSDHHEDHEIESVGAEDAIEEARDRRKPVRRHYKIQEVIKRRQILLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAQDRKRLKEVVADLEVPKGMGVILRTAGESRTKAEIKRDYEYLMRLWENVRSLTLQSSAPALVYEEGSLIKRSVRDLYNKEIDEILVSGEDGYREAKDFMRMLMPSHAKAVQPYRDSTPIFARNGIEAQLDKMLQPQVTLKSGGYIIINQTEALVSIDVNSGRSTKEHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVIDFIDMEENRNNRAVEKKLKDCLKNDRARIQVGRISHFGLMEMSRQRIRASVLESTMKPCPTCGGTGHVRSDSSVALLVVRAIEEFLLKDARNHITVKTPVATALYVLNHKRATLVELEQRFGLTITIEADDSVGAQHYAIFRGAVAEKPVAPTLPVQAPAYAEPEEVEEDIVVEEDEEVADTAEAPSSRQQHAASEGDDKHDRKRRRRRRRRGGRDREHGAPVEGEAVAAEAEESAEGEASEGASEEVVSEPVAAEAAATDDAAAKKRRRGKRGGKRNRKDGEEAADAEANEVADEVAAAEAVEAAPAVELEAAVEVPVEPTPAEEPVAEAKPKKPRRSTKAKKAAEETAETVAEEALAPATEQPEAESAKKAAKPRASRRKTAAAPVDEVVMVAEAVEEQVAVPAKPVVTSVVEGDADATSEAKPKKAGWWQRKGFF*