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cn_combo_scaffold_1004_15

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13099..13428)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000363E7FE similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 109.0
  • Bit_score: 193
  • Evalue 1.50e-46
Small multidrug resistance protein {ECO:0000313|EMBL:EKF43768.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitr similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 109.0
  • Bit_score: 168
  • Evalue 5.40e-39
small Multidrug Resistance family protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 108.0
  • Bit_score: 153
  • Evalue 4.70e-35

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTGAACTACGTCTATCTGATCATTGCGATCGCCTTCGAGGTCGTGGCCACCTCGGCGCTCAAGGAAACGCAAGGTTTCACCAAGCTCATTCCCTCCATCATCGCCCTCGCAGGTTATGGCTTCGCCTTCTACTTCCTCTCACTTGTGCTGAGGGTCGTGCCGGTGGGCGTCGTCTACGCGCTCTGGTCAGGGGCCGGGATCGTCTTCATCACCGGGATCGCCTGGGTATGGTTCCGCCAGTCGCTCGACTTGCCGGCGGTGCTCGGCATCGGCCTGATCATGGCCGGCGTGGTGGTCATCAACCTGTTTTCGAAATCCGTCGTCCACTGA
PROTEIN sequence
Length: 110
LNYVYLIIAIAFEVVATSALKETQGFTKLIPSIIALAGYGFAFYFLSLVLRVVPVGVVYALWSGAGIVFITGIAWVWFRQSLDLPAVLGIGLIMAGVVVINLFSKSVVH*